RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 SIGLEC6O43699 453 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 MAFKO60675 156 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 NEBLO76041 1014 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 GM2AP17900 193 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 ACADVLP49748 655 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 ADKP55263 362 aaKnown RBP12.74□□□□□ -0.37
HSPG2-212ENST00000493940 PFN3P60673 137 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 EIF2B5Q13144 721 aaKnown RBP12.74□□□□□ -0.37
HSPG2-212ENST00000493940 SKOR2Q2VWA4 1001 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-212ENST00000493940 SLC45A4Q5BKX6 768 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 KCTD16Q68DU8 428 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 PTAR1Q7Z6K3 402 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-212ENST00000493940 VSTM4Q8IW00 320 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 PELI3Q8N2H9 469 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 TP53I13Q8NBR0 393 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-212ENST00000493940 FAM71BQ8TC56 605 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 RAB7BQ96AH8 199 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 TRIM11Q96F44 468 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 DNAJC7Q99615 494 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 OSBPL1AQ9BXW6 950 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 PCDH12Q9NPG4 1184 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 DKK3Q9UBP4 350 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 FTSJ1Q9UET6 329 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 IPO11Q9UI26 975 aaKnown RBP12.74□□□□□ -0.37
HSPG2-212ENST00000493940 LHX6Q9UPM6 363 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 U3KQA8 63 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 A0A0U1RQS6 177 aa12.73□□□□□ -0.37
HSPG2-212ENST00000493940 SPTY2D1-AS1A0A0U1RR47 76 aa12.73□□□□□ -0.37
HSPG2-212ENST00000493940 ARHGAP42A6NI28 874 aa12.73□□□□□ -0.37
HSPG2-212ENST00000493940 EIF3CLB5ME19 914 aaKnown RBP12.73□□□□□ -0.37
HSPG2-212ENST00000493940 TRAFD1O14545 582 aaPredicted RBP12.73□□□□□ -0.37
HSPG2-212ENST00000493940 PALMO75781 387 aa12.73□□□□□ -0.37
HSPG2-212ENST00000493940 PIAS2O75928 621 aa12.73□□□□□ -0.37
HSPG2-212ENST00000493940 ARRB1P49407 418 aaPredicted RBP12.73□□□□□ -0.37
HSPG2-212ENST00000493940 IL10RBQ08334 325 aa12.73□□□□□ -0.37
HSPG2-212ENST00000493940 CCDC15Q0P6D6 951 aa12.73□□□□□ -0.37
HSPG2-212ENST00000493940 PIGHQ14442 188 aaPredicted RBP12.73□□□□□ -0.37
HSPG2-212ENST00000493940 SMAD1Q15797 465 aaKnown RBP12.73□□□□□ -0.37
HSPG2-212ENST00000493940 UGP2Q16851 508 aa12.73□□□□□ -0.37
HSPG2-212ENST00000493940 PROX2Q3B8N5 592 aa12.73□□□□□ -0.37
HSPG2-212ENST00000493940 TMEM52BQ4KMG9 183 aa12.73□□□□□ -0.37
HSPG2-212ENST00000493940 BOLA3Q53S33 107 aa12.73□□□□□ -0.37
HSPG2-212ENST00000493940 KYAT3Q6YP21 454 aaKnown RBP12.73□□□□□ -0.37
HSPG2-212ENST00000493940 VPS36Q86VN1 386 aa12.73□□□□□ -0.37
HSPG2-212ENST00000493940 TEKT4Q8WW24 435 aa12.73□□□□□ -0.37
HSPG2-212ENST00000493940 ASB12Q8WXK4 309 aa12.73□□□□□ -0.37
HSPG2-212ENST00000493940 SMIM14Q96QK8 99 aa12.73□□□□□ -0.37
HSPG2-212ENST00000493940 EIF3CQ99613 913 aaKnown RBP12.73□□□□□ -0.37
HSPG2-212ENST00000493940 TSPY26PQ9H489 355 aa12.73□□□□□ -0.37
HSPG2-212ENST00000493940 IP6K2Q9UHH9 426 aa12.73□□□□□ -0.37
HSPG2-212ENST00000493940 BPTFQ12830 3046 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 A6NNZ2 444 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 A8MX80 341 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 H3BRJ5 948 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 NEMP1O14524 444 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 RIOK3O14730 519 aaKnown RBP12.72□□□□□ -0.37
HSPG2-212ENST00000493940 FFAR2O15552 330 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 MAGEC1O60732 1142 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 MAP3K6O95382 1288 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 CR2P20023 1033 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 PTMSP20962 102 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 CSNK1DP48730 415 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 SLC10A2Q12908 348 aaPredicted RBP12.72□□□□□ -0.37
HSPG2-212ENST00000493940 RALGDSQ12967 914 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 TBX2Q13207 712 aaPredicted RBP12.72□□□□□ -0.37
HSPG2-212ENST00000493940 SGCGQ13326 291 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 DPYSL3Q14195 570 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 SLC18A3Q16572 532 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 WSCD2Q2TBF2 565 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 SPECC1LQ69YQ0 1117 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 RBFAQ8N0V3 343 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 PLA2G15Q8NCC3 412 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 OR8K1Q8NGG5 319 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 PCDH19Q8TAB3 1148 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 ZNF564Q8TBZ8 553 aaPredicted RBP12.72□□□□□ -0.37
HSPG2-212ENST00000493940 MDM1Q8TC05 714 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 ECHDC3Q96DC8 303 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 SP110Q9HB58 689 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 SPTLC3Q9NUV7 552 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 PCDHGC4Q9Y5F7 938 aa12.72□□□□□ -0.37
HSPG2-212ENST00000493940 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.72□□□□□ -0.373e-6■■□□□ 14.2
HSPG2-212ENST00000493940 MYO1FO00160 1098 aa12.71□□□□□ -0.37
HSPG2-212ENST00000493940 FPGTO14772 594 aa12.71□□□□□ -0.37
HSPG2-212ENST00000493940 GCATO75600 419 aa12.71□□□□□ -0.37
HSPG2-212ENST00000493940 TM7SF2O76062 418 aa12.71□□□□□ -0.37
HSPG2-212ENST00000493940 PROSCO94903 275 aa12.71□□□□□ -0.37
HSPG2-212ENST00000493940 CELA2BP08218 269 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-212ENST00000493940 C6P13671 934 aa12.71□□□□□ -0.37
HSPG2-212ENST00000493940 DESP17661 470 aa12.71□□□□□ -0.37
HSPG2-212ENST00000493940 MMP12P39900 470 aa12.71□□□□□ -0.37
HSPG2-212ENST00000493940 SCNN1BP51168 640 aa12.71□□□□□ -0.37
HSPG2-212ENST00000493940 CDH6P55285 790 aa12.71□□□□□ -0.37
HSPG2-212ENST00000493940 MAXP61244 160 aa12.71□□□□□ -0.37
HSPG2-212ENST00000493940 RAD51Q06609 339 aa12.71□□□□□ -0.37
HSPG2-212ENST00000493940 NSUN2Q08J23 767 aaKnown RBP eCLIP12.71□□□□□ -0.37
HSPG2-212ENST00000493940 C1orf61Q13536 156 aa12.71□□□□□ -0.37
HSPG2-212ENST00000493940 PDE1CQ14123 709 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-212ENST00000493940 LBRQ14739 615 aaKnown RBP12.71□□□□□ -0.37
HSPG2-212ENST00000493940 IRF4Q15306 451 aa12.71□□□□□ -0.37
HSPG2-212ENST00000493940 NCBP2-AS2Q69YL0 99 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms