RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 RMDN1Q96DB5 314 aa7.67□□□□□ -1.18
VEGFA-214ENST00000493786 ZNF419Q96HQ0 510 aaPredicted RBP7.67□□□□□ -1.18
VEGFA-214ENST00000493786 KRT12Q99456 494 aa7.67□□□□□ -1.18
VEGFA-214ENST00000493786 TDRD1Q9BXT4 1180 aaKnown RBP7.67□□□□□ -1.18
VEGFA-214ENST00000493786 HDAC8Q9BY41 377 aa7.67□□□□□ -1.18
VEGFA-214ENST00000493786 BTBD1Q9H0C5 482 aa7.67□□□□□ -1.18
VEGFA-214ENST00000493786 DDX47Q9H0S4 455 aaKnown RBP7.67□□□□□ -1.18
VEGFA-214ENST00000493786 IRF2BPLQ9H1B7 796 aa7.67□□□□□ -1.18
VEGFA-214ENST00000493786 SGK2Q9HBY8 427 aa7.67□□□□□ -1.18
VEGFA-214ENST00000493786 PCDH9Q9HC56 1237 aa7.67□□□□□ -1.18
VEGFA-214ENST00000493786 CD248Q9HCU0 757 aa7.67□□□□□ -1.18
VEGFA-214ENST00000493786 ITM2CQ9NQX7 267 aa7.67□□□□□ -1.18
VEGFA-214ENST00000493786 RAB6BQ9NRW1 208 aa7.67□□□□□ -1.18
VEGFA-214ENST00000493786 ZSCAN32Q9NX65 697 aa7.67□□□□□ -1.18
VEGFA-214ENST00000493786 UBP1Q9NZI7 540 aa7.67□□□□□ -1.18
VEGFA-214ENST00000493786 USP36Q9P275 1121 aaKnown RBP7.67□□□□□ -1.18
VEGFA-214ENST00000493786 ASIC3Q9UHC3 531 aa7.67□□□□□ -1.18
VEGFA-214ENST00000493786 SARDHQ9UL12 918 aa7.67□□□□□ -1.18
VEGFA-214ENST00000493786 CYP8B1Q9UNU6 501 aa7.67□□□□□ -1.18
VEGFA-214ENST00000493786 ARIH1Q9Y4X5 557 aaPredicted RBP7.67□□□□□ -1.18
VEGFA-214ENST00000493786 PCDHB9Q9Y5E1 797 aa7.67□□□□□ -1.18
VEGFA-214ENST00000493786 PCDHGC4Q9Y5F7 938 aa7.67□□□□□ -1.18
VEGFA-214ENST00000493786 MRFAP1Q9Y605 127 aa7.67□□□□□ -1.18
VEGFA-214ENST00000493786 ZDBF2Q9HCK1 2354 aa7.67□□□□□ -1.18
VEGFA-214ENST00000493786 ATG2BQ96BY7 2078 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 FAM47DPA6NHR8 397 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 ERI2A8K979 691 aaKnown RBP7.66□□□□□ -1.18
VEGFA-214ENST00000493786 PDE2AO00408 941 aaPredicted RBP7.66□□□□□ -1.18
VEGFA-214ENST00000493786 NDC80O14777 642 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 HTRA2O43464 458 aaPredicted RBP7.66□□□□□ -1.18
VEGFA-214ENST00000493786 GJB3O75712 270 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 RPP40O75818 363 aaKnown RBP7.66□□□□□ -1.18
VEGFA-214ENST00000493786 PGLSO95336 258 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 MT-CYBP00156 380 aaPredicted RBP7.66□□□□□ -1.18
VEGFA-214ENST00000493786 MMP2P08253 660 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 SP9P0CG40 484 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 CYP2A6P11509 494 aaPredicted RBP7.66□□□□□ -1.18
VEGFA-214ENST00000493786 ADRB3P13945 408 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 CD68P34810 354 aaPredicted RBP7.66□□□□□ -1.18
VEGFA-214ENST00000493786 CNR2P34972 360 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 ADCY8P40145 1251 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 VPS41P49754 854 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 WNT3AP56704 352 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 RPL26P61254 145 aaKnown RBP7.66□□□□□ -1.18
VEGFA-214ENST00000493786 FAM193AP78312 1265 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 SARNPP82979 210 aaKnown RBP7.66□□□□□ -1.18
VEGFA-214ENST00000493786 CDK18Q07002 472 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 TRAF2Q12933 501 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 GPS1Q13098 491 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 TRIP13Q15645 432 aaPredicted RBP7.66□□□□□ -1.18
VEGFA-214ENST00000493786 NAPEPLDQ6IQ20 393 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 PPP1R21Q6ZMI0 780 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 CEP68Q76N32 757 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 KDELC2Q7Z4H8 507 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 LINC00523Q86TU6 105 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 AADATQ8N5Z0 425 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 IPMKQ8NFU5 416 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 SPATA22Q8NHS9 363 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 CXorf40AQ8TE69 158 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 RLN3Q8WXF3 142 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 ARRDC3Q96B67 414 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 FEM1CQ96JP0 617 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 SRPK1Q96SB4 655 aaKnown RBP7.66□□□□□ -1.18
VEGFA-214ENST00000493786 TBL1YQ9BQ87 522 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 NEUROG2Q9H2A3 272 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 KDM4CQ9H3R0 1056 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 LRRC40Q9H9A6 602 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 PREBQ9HCU5 417 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 PCYOX1Q9UHG3 505 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 PHTF1Q9UMS5 762 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 RPL26L1Q9UNX3 145 aaKnown RBP7.66□□□□□ -1.18
VEGFA-214ENST00000493786 CHKBQ9Y259 395 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 PCDHGA2Q9Y5H1 932 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 SHROOM3Q8TF72 1996 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 CKAP5Q14008 2032 aa7.66□□□□□ -1.18
VEGFA-214ENST00000493786 MYO18AQ92614 2054 aaKnown RBP7.66□□□□□ -1.18
VEGFA-214ENST00000493786 TBC1D3DA0A087WVF3 549 aa7.65□□□□□ -1.18
VEGFA-214ENST00000493786 TBC1D3IA0A087WXS9 549 aa7.65□□□□□ -1.18
VEGFA-214ENST00000493786 TBC1D3EA0A087X179 549 aa7.65□□□□□ -1.18
VEGFA-214ENST00000493786 TBC1D3KA0A087X1G2 549 aa7.65□□□□□ -1.18
VEGFA-214ENST00000493786 IGHV1OR15-9A0A0B4J2B8 117 aa7.65□□□□□ -1.18
VEGFA-214ENST00000493786 TSPAN11A1L157 253 aa7.65□□□□□ -1.18
VEGFA-214ENST00000493786 TBC1D3FA6NER0 549 aaPredicted RBP7.65□□□□□ -1.18
VEGFA-214ENST00000493786 PRR23AA6NEV1 266 aa7.65□□□□□ -1.18
VEGFA-214ENST00000493786 FAM187AA6NFU0 413 aa7.65□□□□□ -1.18
VEGFA-214ENST00000493786 TBC1D3LB9A6J9 549 aa7.65□□□□□ -1.18
VEGFA-214ENST00000493786 PLK4O00444 970 aa7.65□□□□□ -1.18
VEGFA-214ENST00000493786 TRAFD1O14545 582 aaPredicted RBP7.65□□□□□ -1.18
VEGFA-214ENST00000493786 TSPAN6O43657 245 aa7.65□□□□□ -1.18
VEGFA-214ENST00000493786 PLRG1O43660 514 aaKnown RBP7.65□□□□□ -1.18
VEGFA-214ENST00000493786 AP1G1O43747 822 aa7.65□□□□□ -1.18
VEGFA-214ENST00000493786 PCDH8O95206 1070 aa7.65□□□□□ -1.18
VEGFA-214ENST00000493786 SEMA4FO95754 770 aa7.65□□□□□ -1.18
VEGFA-214ENST00000493786 NDST3O95803 873 aa7.65□□□□□ -1.18
VEGFA-214ENST00000493786 EPOP01588 193 aa7.65□□□□□ -1.18
VEGFA-214ENST00000493786 IGLV3-19P01714 112 aa7.65□□□□□ -1.18
VEGFA-214ENST00000493786 FGF1P05230 155 aa7.65□□□□□ -1.18
VEGFA-214ENST00000493786 APRTP07741 180 aa7.65□□□□□ -1.18
VEGFA-214ENST00000493786 TBC1D3HP0C7X1 549 aa7.65□□□□□ -1.18
VEGFA-214ENST00000493786 ZSCAN5DPP0CG00 497 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms