RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 SORBS3O60504 671 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 GMDSO60547 372 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 KCNK2O95069 426 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 AOC1P19801 751 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 F8A1P23610 371 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 GABRB3P28472 473 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 CHRNA5P30532 468 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 SSTR1P30872 391 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 CYP2C18P33260 490 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 GRIA1P42261 906 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 ALDH7A1P49419 539 aaKnown RBP6.91□□□□□ -1.3
VPS13B-205ENST00000493587 TRAP1Q12931 704 aaKnown RBP6.91□□□□□ -1.3
VPS13B-205ENST00000493587 GALNT3Q14435 633 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 COLEC12Q5KU26 742 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 CYP2R1Q6VVX0 501 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 POLNQ7Z5Q5 900 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 NOXA1Q86UR1 476 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 P3H2Q8IVL5 708 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 ZDHHC14Q8IZN3 488 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 TBC1D19Q8N5T2 526 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 SLC5A11Q8WWX8 675 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 DLG3Q92796 817 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 ZNF668Q96K58 619 aaPredicted RBP6.91□□□□□ -1.3
VPS13B-205ENST00000493587 MBOAT7Q96N66 472 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 NECTIN4Q96NY8 510 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 RIOX1Q9H6W3 641 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 BLOC1S4Q9NUP1 217 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 KBTBD4Q9NVX7 518 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 BAG5Q9UL15 447 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 RIPK3Q9Y572 518 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 PCDHAC2Q9Y5I4 1007 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 A0A0G2JMP0 313 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 GCATO75600 419 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 APOA4P06727 396 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 P4HBP07237 508 aaKnown RBP6.91□□□□□ -1.3
VPS13B-205ENST00000493587 ABHD2P08910 425 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 CHRM5P08912 532 aaPredicted RBP6.91□□□□□ -1.3
VPS13B-205ENST00000493587 COX4I1P13073 169 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 IL7P13232 177 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 ZNF250P15622 560 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 ACAT1P24752 427 aaKnown RBP6.91□□□□□ -1.3
VPS13B-205ENST00000493587 KPNA2P52292 529 aaKnown RBP6.91□□□□□ -1.3
VPS13B-205ENST00000493587 S100A12P80511 92 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 PPATQ06203 517 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 DSC1Q08554 894 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 CA9Q16790 459 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 ZBTB41Q5SVQ8 909 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 ARMC4Q5T2S8 1044 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 ATF7IP2Q5U623 682 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 FAM160B1Q5W0V3 765 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 ZNF425Q6IV72 752 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 PM20D2Q8IYS1 436 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 GUF1Q8N442 669 aaKnown RBP6.91□□□□□ -1.3
VPS13B-205ENST00000493587 GLB1L3Q8NCI6 653 aaPredicted RBP6.91□□□□□ -1.3
VPS13B-205ENST00000493587 AGR3Q8TD06 166 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 FAR1Q8WVX9 515 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 NCLNQ969V3 563 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 TMEM80Q96HE8 168 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 BTBD6Q96KE9 485 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 BDH2Q9BUT1 245 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 ADI1Q9BV57 179 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 PPA2Q9H2U2 334 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 PCDHB16Q9NRJ7 776 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 SDHAF3Q9NRP4 125 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 GGA1Q9UJY5 639 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 ACAD8Q9UKU7 415 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 SORCS3Q9UPU3 1222 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 PCDHA3Q9Y5H8 950 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 CSADQ9Y600 493 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 SYN3O14994 580 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 BANF1O75531 89 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 KRT1P04264 644 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 ZBTB48P10074 688 aaPredicted RBP6.9□□□□□ -1.3
VPS13B-205ENST00000493587 SPNP16150 400 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 ZNF26P17031 533 aaPredicted RBP6.9□□□□□ -1.3
VPS13B-205ENST00000493587 DNAJB1P25685 340 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 POU1F1P28069 291 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 GPC1P35052 558 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 NME5P56597 212 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 ACTR2P61160 394 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 SSTP61278 116 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 LRRC74AQ0VAA2 488 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 SGCAQ16586 387 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 RBM20Q5T481 1227 aaKnown RBP6.9□□□□□ -1.3
VPS13B-205ENST00000493587 RNASEH2BQ5TBB1 312 aaKnown RBP6.9□□□□□ -1.3
VPS13B-205ENST00000493587 GRTP1Q5TC63 336 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 KCTD1Q719H9 257 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 ZC3H3Q8IXZ2 948 aaKnown RBP6.9□□□□□ -1.3
VPS13B-205ENST00000493587 CCDC36Q8IYA8 594 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 TAGAPQ8N103 731 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 KYQ8NBH2 561 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 OR6F1Q8NGZ6 308 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 GTF3C2Q8WUA4 911 aaPredicted RBP6.9□□□□□ -1.3
VPS13B-205ENST00000493587 DEDD2Q8WXF8 326 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 PHOX2BQ99453 314 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 CLSTN3Q9BQT9 956 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 COPS4Q9BT78 406 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 DNAJC11Q9NVH1 559 aa6.9□□□□□ -1.3
VPS13B-205ENST00000493587 DNMT3BQ9UBC3 853 aaKnown RBP6.9□□□□□ -1.3
VPS13B-205ENST00000493587 TRPS1Q9UHF7 1281 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms