RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 LCP1P13796 627 aa19.89■□□□□ 0.77
SDF4-205ENST00000465727 NMBRP28336 390 aa19.89■□□□□ 0.77
SDF4-205ENST00000465727 AVPR1AP37288 418 aa19.89■□□□□ 0.77
SDF4-205ENST00000465727 TKTL1P51854 596 aa19.89■□□□□ 0.77
SDF4-205ENST00000465727 SPATS1Q496A3 300 aa19.89■□□□□ 0.77
SDF4-205ENST00000465727 CCDC92Q53HC0 331 aaPredicted RBP19.89■□□□□ 0.77
SDF4-205ENST00000465727 NAPEPLDQ6IQ20 393 aa19.89■□□□□ 0.77
SDF4-205ENST00000465727 EFCAB12Q6NXP0 572 aa19.89■□□□□ 0.77
SDF4-205ENST00000465727 FAM117BQ6P1L5 589 aa19.89■□□□□ 0.77
SDF4-205ENST00000465727 SLC41A1Q8IVJ1 513 aa19.89■□□□□ 0.77
SDF4-205ENST00000465727 TXNDC5Q8NBS9 432 aaKnown RBP19.89■□□□□ 0.77
SDF4-205ENST00000465727 NXNL1Q96CM4 212 aa19.89■□□□□ 0.77
SDF4-205ENST00000465727 MLPHQ9BV36 600 aaPredicted RBP19.89■□□□□ 0.77
SDF4-205ENST00000465727 HOXC10Q9NYD6 342 aa19.89■□□□□ 0.77
SDF4-205ENST00000465727 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.89■□□□□ 0.77
SDF4-205ENST00000465727 ABCD2Q9UBJ2 740 aa19.89■□□□□ 0.77
SDF4-205ENST00000465727 SEPT3Q9UH03 358 aa19.89■□□□□ 0.77
SDF4-205ENST00000465727 FNDC1Q4ZHG4 1894 aaPredicted RBP19.88■□□□□ 0.77
SDF4-205ENST00000465727 CLOCKO15516 846 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 CPNE6O95741 557 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 PGK1P00558 417 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 AHSGP02765 367 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 SLC26A2P50443 739 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 CCT8P50990 548 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 BMXP51813 675 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 HMGCS2P54868 508 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 LCN8Q6JVE9 175 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 XKR5Q6UX68 686 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 TMEM26Q6ZUK4 368 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 LINC00523Q86TU6 105 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 NETO2Q8NC67 525 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 GPR20Q99678 358 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 DOLKQ9UPQ8 538 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 TMED5Q9Y3A6 229 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 TMEM247A6NEH6 219 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 ZBTB24O43167 697 aaPredicted RBP19.88■□□□□ 0.77
SDF4-205ENST00000465727 FOXD2O60548 495 aaPredicted RBP19.88■□□□□ 0.77
SDF4-205ENST00000465727 HSD17B1P14061 328 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 CCNA2P20248 432 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 CAPGP40121 348 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 NFATC3Q12968 1075 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 AMHR2Q16671 573 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 INTS6LQ5JSJ4 861 aaKnown RBP19.88■□□□□ 0.77
SDF4-205ENST00000465727 KCTD8Q6ZWB6 473 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 IFNLR1Q8IU57 520 aaPredicted RBP19.88■□□□□ 0.77
SDF4-205ENST00000465727 ACDQ96AP0 544 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 OSBPL2Q9H1P3 480 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 MYOZ2Q9NPC6 264 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 PKD2L2Q9NZM6 624 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 AURKCQ9UQB9 309 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 ERGIC3Q9Y282 383 aa19.88■□□□□ 0.77
SDF4-205ENST00000465727 CFAP99D6REC4 459 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 TMX2-CTNND1H3BSU7 103 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 PSMD3O43242 534 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 DAB1O75553 588 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 HLCSP50747 726 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 AIF1P55008 147 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 C1QTNF8P60827 252 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 STX1BP61266 288 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 BNIP3Q12983 259 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 DCAF6Q58WW2 860 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 OGFOD2Q6N063 350 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 BNIPLQ7Z465 357 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 DEFB106AQ8N104 65 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 DHRSXQ8N5I4 330 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 NT5C3BQ969T7 300 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 KIF12Q96FN5 646 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 OLFM1Q99784 485 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 TBC1D13Q9NVG8 400 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 PLXNA1Q9UIW2 1896 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 FAM95CA0A1B0GW59 222 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 GOLGA8TH3BQL2 631 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 SEC24DO94855 1032 aaPredicted RBP19.87■□□□□ 0.77
SDF4-205ENST00000465727 GPIP06744 558 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 HDCP19113 662 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 CD247P20963 164 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 CD68P34810 354 aaPredicted RBP19.87■□□□□ 0.77
SDF4-205ENST00000465727 NOS2P35228 1153 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 CLCN3P51790 818 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 TUBA3CQ13748 450 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 NR1D2Q14995 579 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 OR13F1Q8NGS4 319 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 CYGBQ8WWM9 190 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 TANKQ92844 425 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.87■□□□□ 0.776e-6■■□□□ 12.4
SDF4-205ENST00000465727 SNX27Q96L92 541 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 MYRFLQ96LU7 910 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 OMDQ99983 421 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 SMPD3Q9NY59 655 aaPredicted RBP19.87■□□□□ 0.77
SDF4-205ENST00000465727 ACTR3BQ9P1U1 418 aa19.87■□□□□ 0.77
SDF4-205ENST00000465727 COL4A5P29400 1685 aa19.86■□□□□ 0.77
SDF4-205ENST00000465727 SCN1AP35498 2009 aa19.86■□□□□ 0.77
SDF4-205ENST00000465727 CCDC162PA2VCL2 907 aa19.86■□□□□ 0.77
SDF4-205ENST00000465727 HTR3EA5X5Y0 456 aa19.86■□□□□ 0.77
SDF4-205ENST00000465727 ADAM23O75077 832 aa19.86■□□□□ 0.77
SDF4-205ENST00000465727 HNRNPLP14866 589 aaKnown RBP eCLIP19.86■□□□□ 0.77
SDF4-205ENST00000465727 PTPRAP18433 802 aa19.86■□□□□ 0.77
SDF4-205ENST00000465727 MAP4P27816 1152 aaKnown RBP19.86■□□□□ 0.77
SDF4-205ENST00000465727 PRPSAP1Q14558 356 aa19.86■□□□□ 0.77
SDF4-205ENST00000465727 LAYNQ6UX15 382 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms