RNA–Protein interactions for RNA: ENST00000454141.5

SEC22C-212, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 780 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-212ENST00000454141 RFX8Q6ZV50 586 aa18.48■□□□□ 0.55
SEC22C-212ENST00000454141 PHACTR4Q8IZ21 702 aa18.48■□□□□ 0.55
SEC22C-212ENST00000454141 SNIP1Q8TAD8 396 aaKnown RBP18.48■□□□□ 0.55
SEC22C-212ENST00000454141 FNIP1Q8TF40 1166 aa18.48■□□□□ 0.55
SEC22C-212ENST00000454141 ZNF653Q96CK0 615 aa18.48■□□□□ 0.55
SEC22C-212ENST00000454141 TBATAQ96M53 351 aa18.48■□□□□ 0.55
SEC22C-212ENST00000454141 ZNF641Q96N77 438 aaPredicted RBP18.48■□□□□ 0.55
SEC22C-212ENST00000454141 DEPDC7Q96QD5 511 aa18.48■□□□□ 0.55
SEC22C-212ENST00000454141 KCTD15Q96SI1 283 aaPredicted RBP18.48■□□□□ 0.55
SEC22C-212ENST00000454141 IL12RB2Q99665 862 aa18.48■□□□□ 0.55
SEC22C-212ENST00000454141 TRIM7Q9C029 511 aa18.48■□□□□ 0.55
SEC22C-212ENST00000454141 SLC39A8Q9C0K1 460 aa18.48■□□□□ 0.55
SEC22C-212ENST00000454141 ABCG4Q9H172 646 aa18.48■□□□□ 0.55
SEC22C-212ENST00000454141 TCEAL2Q9H3H9 227 aaPredicted RBP18.48■□□□□ 0.55
SEC22C-212ENST00000454141 SUV39H2Q9H5I1 410 aa18.48■□□□□ 0.55
SEC22C-212ENST00000454141 CNOT8Q9UFF9 292 aaKnown RBP18.48■□□□□ 0.55
SEC22C-212ENST00000454141 SALL4Q9UJQ4 1053 aa18.48■□□□□ 0.55
SEC22C-212ENST00000454141 SCINQ9Y6U3 715 aa18.48■□□□□ 0.55
SEC22C-212ENST00000454141 A0A1B0GTH6 734 aa18.47■□□□□ 0.55
SEC22C-212ENST00000454141 DDX3XO00571 662 aaKnown RBP eCLIP18.47■□□□□ 0.553e-11■■■■■ 36.2
SEC22C-212ENST00000454141 RRP8O43159 456 aaKnown RBP18.47■□□□□ 0.55
SEC22C-212ENST00000454141 FTLP02792 175 aaPredicted RBP18.47■□□□□ 0.55
SEC22C-212ENST00000454141 MIPP30301 263 aa18.47■□□□□ 0.55
SEC22C-212ENST00000454141 EIF4A3P38919 411 aaKnown RBP18.47■□□□□ 0.55
SEC22C-212ENST00000454141 ZNF165P49910 485 aa18.47■□□□□ 0.55
SEC22C-212ENST00000454141 KLHL30Q0D2K2 578 aa18.47■□□□□ 0.55
SEC22C-212ENST00000454141 LRRC14Q15048 493 aa18.47■□□□□ 0.55
SEC22C-212ENST00000454141 IRF4Q15306 451 aa18.47■□□□□ 0.55
SEC22C-212ENST00000454141 CDKN3Q16667 212 aa18.47■□□□□ 0.55
SEC22C-212ENST00000454141 PRRT3Q5FWE3 981 aa18.47■□□□□ 0.55
SEC22C-212ENST00000454141 PPP6R3Q5H9R7 873 aaPredicted RBP18.47■□□□□ 0.55
SEC22C-212ENST00000454141 AFMIDQ63HM1 303 aa18.47■□□□□ 0.55
SEC22C-212ENST00000454141 ERAP2Q6P179 960 aa18.47■□□□□ 0.55
SEC22C-212ENST00000454141 GUSBP11Q6P575 273 aa18.47■□□□□ 0.55
SEC22C-212ENST00000454141 BRAT1Q6PJG6 821 aa18.47■□□□□ 0.55
SEC22C-212ENST00000454141 LRRC69Q6ZNQ3 347 aa18.47■□□□□ 0.55
SEC22C-212ENST00000454141 CYP4V2Q6ZWL3 525 aaPredicted RBP18.47■□□□□ 0.55
SEC22C-212ENST00000454141 ARHGAP12Q8IWW6 846 aa18.47■□□□□ 0.55
SEC22C-212ENST00000454141 TSEN2Q8NCE0 465 aaKnown RBP18.47■□□□□ 0.55
SEC22C-212ENST00000454141 MAPK15Q8TD08 544 aa18.47■□□□□ 0.55
SEC22C-212ENST00000454141 CRELD1Q96HD1 420 aa18.47■□□□□ 0.55
SEC22C-212ENST00000454141 TUBGCP5Q96RT8 1024 aa18.47■□□□□ 0.55
SEC22C-212ENST00000454141 LRRC61Q9BV99 259 aa18.47■□□□□ 0.55
SEC22C-212ENST00000454141 SLC13A1Q9BZW2 595 aa18.47■□□□□ 0.55
SEC22C-212ENST00000454141 PCDH12Q9NPG4 1184 aa18.47■□□□□ 0.55
SEC22C-212ENST00000454141 PNMA8BQ9ULN7 279 aaPredicted RBP18.47■□□□□ 0.55
SEC22C-212ENST00000454141 COQ6Q9Y2Z9 468 aa18.47■□□□□ 0.55
SEC22C-212ENST00000454141 SMG1Q96Q15 3661 aaKnown RBP18.46■□□□□ 0.55
SEC22C-212ENST00000454141 LRCH4O75427 683 aa18.46■□□□□ 0.55
SEC22C-212ENST00000454141 GCATO75600 419 aa18.46■□□□□ 0.55
SEC22C-212ENST00000454141 PALMO75781 387 aa18.46■□□□□ 0.55
SEC22C-212ENST00000454141 C6P13671 934 aa18.46■□□□□ 0.55
SEC22C-212ENST00000454141 ERCC2P18074 760 aa18.46■□□□□ 0.55
SEC22C-212ENST00000454141 ITPKBP27987 946 aa18.46■□□□□ 0.55
SEC22C-212ENST00000454141 ACTN2P35609 894 aa18.46■□□□□ 0.55
SEC22C-212ENST00000454141 MMP12P39900 470 aa18.46■□□□□ 0.55
SEC22C-212ENST00000454141 RGRP47804 291 aa18.46■□□□□ 0.55
SEC22C-212ENST00000454141 CSNK1DP48730 415 aa18.46■□□□□ 0.55
SEC22C-212ENST00000454141 NR0B2Q15466 257 aa18.46■□□□□ 0.55
SEC22C-212ENST00000454141 CAVIN1Q6NZI2 390 aaKnown RBP18.46■□□□□ 0.55
SEC22C-212ENST00000454141 CAMK1DQ8IU85 385 aa18.46■□□□□ 0.55
SEC22C-212ENST00000454141 PSTKQ8IV42 348 aaKnown RBP18.46■□□□□ 0.55
SEC22C-212ENST00000454141 NPWQ8N729 165 aa18.46■□□□□ 0.55
SEC22C-212ENST00000454141 FGF11Q92914 225 aa18.46■□□□□ 0.55
SEC22C-212ENST00000454141 TRIM11Q96F44 468 aa18.46■□□□□ 0.55
SEC22C-212ENST00000454141 NAP1L5Q96NT1 182 aaPredicted RBP18.46■□□□□ 0.55
SEC22C-212ENST00000454141 ATP13A3Q9H7F0 1226 aa18.46■□□□□ 0.55
SEC22C-212ENST00000454141 SP110Q9HB58 689 aa18.46■□□□□ 0.55
SEC22C-212ENST00000454141 ATP8A1Q9Y2Q0 1164 aa18.46■□□□□ 0.55
SEC22C-212ENST00000454141 URB1O60287 2271 aaKnown RBP18.46■□□□□ 0.54
SEC22C-212ENST00000454141 CPED1A4D0V7 1026 aa18.45■□□□□ 0.54
SEC22C-212ENST00000454141 EME2A4GXA9 379 aaPredicted RBP18.45■□□□□ 0.54
SEC22C-212ENST00000454141 LMO7DNF2Z398 122 aa18.45■□□□□ 0.54
SEC22C-212ENST00000454141 DFFAO00273 331 aa18.45■□□□□ 0.54
SEC22C-212ENST00000454141 BUB1BO60566 1050 aaPredicted RBP18.45■□□□□ 0.54
SEC22C-212ENST00000454141 CSO75390 466 aaKnown RBP18.45■□□□□ 0.54
SEC22C-212ENST00000454141 MYBL1P10243 752 aa18.45■□□□□ 0.54
SEC22C-212ENST00000454141 SERPINA4P29622 427 aa18.45■□□□□ 0.54
SEC22C-212ENST00000454141 PEX5P50542 639 aa18.45■□□□□ 0.54
SEC22C-212ENST00000454141 ZNF135P52742 658 aaPredicted RBP18.45■□□□□ 0.54
SEC22C-212ENST00000454141 ADKP55263 362 aaKnown RBP18.45■□□□□ 0.54
SEC22C-212ENST00000454141 PPARDQ03181 441 aa18.45■□□□□ 0.54
SEC22C-212ENST00000454141 C1orf61Q13536 156 aa18.45■□□□□ 0.54
SEC22C-212ENST00000454141 COL9A2Q14055 689 aaPredicted RBP18.45■□□□□ 0.54
SEC22C-212ENST00000454141 WSCD2Q2TBF2 565 aa18.45■□□□□ 0.54
SEC22C-212ENST00000454141 TBC1D25Q3MII6 688 aa18.45■□□□□ 0.54
SEC22C-212ENST00000454141 SOWAHCQ53LP3 525 aaPredicted RBP18.45■□□□□ 0.54
SEC22C-212ENST00000454141 FAXCQ5TGI0 409 aa18.45■□□□□ 0.54
SEC22C-212ENST00000454141 EFL1Q7Z2Z2 1120 aaKnown RBP18.45■□□□□ 0.54
SEC22C-212ENST00000454141 SRLQ86TD4 932 aa18.45■□□□□ 0.54
SEC22C-212ENST00000454141 ZSWIM9Q86XI8 627 aa18.45■□□□□ 0.54
SEC22C-212ENST00000454141 GLMNQ92990 594 aa18.45■□□□□ 0.54
SEC22C-212ENST00000454141 CINPQ9BW66 212 aaPredicted RBP18.45■□□□□ 0.54
SEC22C-212ENST00000454141 BOCQ9BWV1 1114 aa18.45■□□□□ 0.54
SEC22C-212ENST00000454141 EDEM3Q9BZQ6 932 aa18.45■□□□□ 0.54
SEC22C-212ENST00000454141 IGSF10Q6WRI0 2623 aa18.45■□□□□ 0.54
SEC22C-212ENST00000454141 KNTC1P50748 2209 aa18.44■□□□□ 0.54
SEC22C-212ENST00000454141 LZTS3O60299 673 aaPredicted RBP18.44■□□□□ 0.54
SEC22C-212ENST00000454141 SERPINC1P01008 464 aa18.44■□□□□ 0.54
SEC22C-212ENST00000454141 ANXA6P08133 673 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms