RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 TPX2Q9ULW0 747 aaKnown RBP17.28■□□□□ 0.36
PRPF40A-204ENST00000450303 SNX12Q9UMY4 172 aa17.28■□□□□ 0.36
PRPF40A-204ENST00000450303 SAR1BQ9Y6B6 198 aa17.28■□□□□ 0.36
PRPF40A-204ENST00000450303 CES2O00748 559 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 FGF10O15520 208 aaPredicted RBP17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 PCDHGA12O60330 932 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 TRIM16O95361 564 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 ZFXP17010 805 aaPredicted RBP17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 ARSEP51690 589 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 NXPH1P58417 271 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 TUBB4BP68371 445 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 CCDC15Q0P6D6 951 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 BNIP3Q12983 259 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 TFDP2Q14188 446 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 DPYSL3Q14195 570 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 STAT4Q14765 748 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 PPP2R5EQ16537 467 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 SETMARQ53H47 684 aaPredicted RBP17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 ATXN7L2Q5T6C5 722 aaPredicted RBP17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 SEL1L3Q68CR1 1132 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 UNQ6494/PRO21346Q6UXR6 183 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 SPOCD1Q6ZMY3 1216 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 RAB44Q7Z6P3 723 aaPredicted RBP17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 SPATS2Q86XZ4 545 aaKnown RBP17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 MFSD2AQ8NA29 543 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 BAHD1Q8TBE0 780 aaPredicted RBP17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 HMCESQ96FZ2 354 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 PPP1R16AQ96I34 528 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 OSBPL9Q96SU4 736 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 HDAC8Q9BY41 377 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 FZD3Q9NPG1 666 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 ZFR2Q9UPR6 939 aaKnown RBP17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 DMTF1Q9Y222 760 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 APOBEC2Q9Y235 224 aaKnown RBP17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 EFR3BQ9Y2G0 817 aa17.27■□□□□ 0.36
PRPF40A-204ENST00000450303 EPG5Q9HCE0 2579 aa17.27■□□□□ 0.35
PRPF40A-204ENST00000450303 TRPM6Q9BX84 2022 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 RASA4BC9J798 803 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 PRAMEF26H0Y7S4 382 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 KRIT1O00522 736 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 RASA4O43374 803 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 CEP104O60308 925 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 DFNA5O60443 496 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 PYGMP11217 842 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 PTPN7P35236 360 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 GRK6P43250 576 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 NEK3P51956 506 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 ZNF284Q2VY69 593 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 CCDC157Q569K6 752 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 ANKRD20A8PQ5CZ79 823 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 FBXL19Q6PCT2 694 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 MFSD7Q6UXD7 560 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 RFX8Q6ZV50 586 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 PARS2Q7L3T8 475 aaKnown RBP17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 GLRX5Q86SX6 157 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 HORMAD1Q86X24 394 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 RFX6Q8HWS3 928 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 MAIP1Q8WWC4 291 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 ISG20Q96AZ6 181 aaKnown RBP17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 RNF157Q96PX1 679 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 NAP1L3Q99457 506 aaPredicted RBP17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 CDC6Q99741 560 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 CWC15Q9P013 229 aaKnown RBP17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 NEUROG3Q9Y4Z2 214 aa17.26■□□□□ 0.35
PRPF40A-204ENST00000450303 AKAP13Q12802 2813 aa17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 TDRD6O60522 2096 aaKnown RBP17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 KRT37O76014 449 aa17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 TJP3O95049 919 aa17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 ITGAVP06756 1048 aa17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 PROS1P07225 676 aa17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 ADRB3P13945 408 aa17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 ITGB7P26010 798 aa17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 CDKN2BP42772 138 aa17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 GEMIN4P57678 1058 aaKnown RBP17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 ZNF211Q13398 564 aaPredicted RBP17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 MYLK3Q32MK0 819 aa17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 OR2AP1Q8NGE2 309 aa17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 ADAMTS14Q8WXS8 1223 aa17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 TSC1Q92574 1164 aa17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 UBXN4Q92575 508 aa17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 GATA6Q92908 595 aa17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 KLHDC7BQ96G42 594 aa17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 CELF6Q96J87 481 aaKnown RBP17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 CSPG4P5Q96PW8 444 aa17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 TMEM121BQ9BXQ6 578 aaPredicted RBP17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 OSBPL8Q9BZF1 889 aa17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 TOR4AQ9NXH8 423 aa17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 RNF14Q9UBS8 474 aa17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 MSRB2Q9Y3D2 182 aa17.25■□□□□ 0.35
PRPF40A-204ENST00000450303 PTPRBP23467 1997 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 CACNA1BQ00975 2339 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 PLXNB3Q9ULL4 1909 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 hCG_1818297A0A087WSY0 165 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 C3orf70A6NLC5 250 aaPredicted RBP17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 C16orf96A6NNT2 1141 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 WASH4PA8MWX3 477 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 TMCC1O94876 653 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 GSRP00390 522 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 UGT2B4P06133 528 aa17.24■□□□□ 0.35
PRPF40A-204ENST00000450303 CD48P09326 243 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms