RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 FAM155AB1AL88 458 aaPredicted RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 DNAJB5O75953 348 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 SNAP29O95721 258 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 NFIXQ14938 502 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 BCL2A1Q16548 175 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 PID1Q7Z2X4 250 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 SPRED1Q7Z699 444 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 CPXCR1Q8N123 301 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 NDNFQ8TB73 568 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 ZUFSPQ96AP4 578 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 CDCA7Q9BWT1 371 aaPredicted RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 RAVER2Q9HCJ3 691 aaKnown RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 ZNF358Q9NW07 568 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 GMIPQ9P107 970 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 TEX28O15482 410 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 ATP5F1P24539 256 aaPredicted RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 MAP2K4P45985 399 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 RGS7P49802 495 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 CACNB3P54284 484 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 ITPK1Q13572 414 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 CAPRIN1Q14444 709 aaKnown RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 CDH24Q86UP0 819 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 SLC22A9Q8IVM8 553 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 ZNF717Q9BY31 904 aaPredicted RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 CYP3A43Q9HB55 503 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 BTG4Q9NY30 223 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 CAPN15O75808 1086 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 GSRP00390 522 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 C6orf141Q5SZD1 244 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 CUZD1Q86UP6 607 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 MAPK15Q8TD08 544 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 ROPN1LQ96C74 230 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 NODALQ96S42 347 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 CPXM1Q96SM3 734 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 ZC3H12CQ9C0D7 883 aaKnown RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 HACD1B0YJ81 288 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 GPIP06744 558 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 GRIK1P39086 918 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 RBM48Q5RL73 367 aaKnown RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 TOR1AIP2Q8NFQ8 470 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 FUNDC2Q9BWH2 189 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 MIR1-1HGQ9H1L0 117 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 NECTIN3Q9NQS3 549 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 EIF2B3Q9NR50 452 aaKnown RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 IL37Q9NZH6 218 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 NUDT5Q9UKK9 219 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 B4GAT1O43505 415 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 SEC14L2O76054 403 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 ALDH1A2O94788 518 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 MLNP12872 115 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 TPH1P17752 444 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 CCR10P46092 362 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 TREML2Q5T2D2 321 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 ZNF544Q6NX49 715 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 OR5B17Q8NGF7 314 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 NEK6Q9HC98 313 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 CCDC167Q9P0B6 97 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 EI24O14681 340 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 BCKDKO14874 412 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 TRIM24O15164 1050 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 STX7O15400 261 aaKnown RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 MAP3K6O95382 1288 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 ADORA2AP29274 412 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 HSPA2P54652 639 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 LIPEQ05469 1076 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 ORC1Q13415 861 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 MAMDC4Q6UXC1 1216 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 SIGLEC10Q96LC7 697 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 COA1Q9GZY4 146 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 ASS1P00966 412 aaKnown RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 MT-ND1P03886 318 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 C4BPAP04003 597 aaKnown RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 C2P06681 752 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 MATN1P21941 496 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 SELENBP1Q13228 472 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 HHIPL2Q6UWX4 724 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 GALNT13Q8IUC8 556 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 C19orf60Q96EN9 201 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 TRMT13Q9NUP7 481 aaKnown RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 FBXO9Q9UK97 447 aaPredicted RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 MON2Q7Z3U7 1717 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 G3V2L1 256 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 POLRMTO00411 1230 aaKnown RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 ACOX3O15254 700 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 DNAJB1P25685 340 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 IRF9Q00978 393 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 BST2Q10589 180 aaKnown RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 IL31Q6EBC2 164 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 APOBEC3HQ6NTF7 200 aaKnown RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 LRRC8DQ7L1W4 858 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 PIWIL3Q7Z3Z3 882 aaKnown RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 KBTBD8Q8NFY9 601 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 ITFG1Q8TB96 612 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 UBA3Q8TBC4 463 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 NUAK2Q9H093 628 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 PIF1Q9H611 641 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 ZDHHC2Q9UIJ5 367 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 TCAF1Q9Y4C2 921 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 HS6ST1O60243 411 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 ATAD3CQ5T2N8 411 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms