RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 B4GALT4O60513 344 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 GUCY1B2O75343 617 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 MYO1DO94832 1006 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 TRUB2O95900 331 aaKnown RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 CHEK2O96017 543 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 MCF2P10911 925 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 TCEA1P23193 301 aaKnown RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 HSPA1LP34931 641 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 GRIA3P42263 894 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 AP3M2P53677 418 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 PHC1P78364 1004 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 SLC35A2P78381 396 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 FAM156AQ8NDB6 213 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 SHCBP1Q8NEM2 672 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 RBBP8Q99708 897 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 CLPBQ9H078 707 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 RHOJQ9H4E5 214 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 WDR55Q9H6Y2 383 aaPredicted RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 SNX15Q9NRS6 342 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 HOMER2Q9NSB8 354 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 KLHL11Q9NVR0 708 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 PAK1IP1Q9NWT1 392 aaPredicted RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 STAP1Q9ULZ2 295 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 ST14Q9Y5Y6 855 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 MAGEB16A2A368 324 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 GPC4O75487 556 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 LYPLA1O75608 230 aaPredicted RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 STAMBPO95630 424 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 FGF4P08620 206 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 SCNN1AP37088 669 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 RPL14P50914 215 aaKnown RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 GJA9P57773 515 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 PPP6R3Q5H9R7 873 aaPredicted RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 ATAD3BQ5T9A4 648 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 KCTD11Q693B1 232 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 XRRA1Q6P2D8 792 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 FAM171BQ6P995 826 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 KCTD8Q6ZWB6 473 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 ESX1Q8N693 406 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 RNF148Q8N7C7 305 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 SLC25A23Q9BV35 468 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 TEKT3Q9BXF9 490 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 RBAKQ9NYW8 714 aaPredicted RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 AFG3L2Q9Y4W6 797 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 CUL9Q8IWT3 2517 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 HEATR9A2RTY3 570 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 SOWAHBA6NEL2 793 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 NPHS1O60500 1241 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 CAPN15O75808 1086 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 NDST3O95803 873 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 AMHP03971 560 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 DNAJB2P25686 324 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 RBL1P28749 1068 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 SPRP35270 261 aaPredicted RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 CAPGP40121 348 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 BCAR1P56945 870 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 GNG2P59768 71 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 HSPA14Q0VDF9 509 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 MMRN1Q13201 1228 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 DUOXA2Q1HG44 320 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 KCNT1Q5JUK3 1230 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 SLFN12LQ6IEE8 588 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 GPAT2Q6NUI2 795 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 RETREG3Q86VR2 466 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 SVOPQ8N4V2 548 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.18□□□□□ -1.58
RIF1-203ENST00000428287 CENPIQ92674 756 aaPredicted RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 PBXIP1Q96AQ6 731 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 CALN1Q9BXU9 219 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 CEP44Q9C0F1 390 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 RAD21L1Q9H4I0 556 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 ZNF358Q9NW07 568 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 CYTH4Q9UIA0 394 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 AGTPBP1Q9UPW5 1226 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 USTQ9Y2C2 406 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 A0A0A0MRY4 1105 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 KPNA7A9QM74 516 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 TPP1O14773 563 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 SLC16A6O15403 523 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 MSCO60682 206 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 RFPL2O75678 378 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 PCMT1P22061 227 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 IREB2P48200 963 aaKnown RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 GBE1Q04446 702 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 RBM48Q5RL73 367 aaKnown RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 LAIR2Q6ISS4 152 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 FKBP9P1Q75LS8 142 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 CNTN4Q8IWV2 1026 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 MPP5Q8N3R9 675 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 LRTOMTQ8WZ04 291 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 SPATA13Q96N96 652 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 UIMC1Q96RL1 719 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 FUNDC2Q9BWH2 189 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 C1QTNF1Q9BXJ1 281 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 LRRC4Q9HBW1 653 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 DSEQ9UL01 958 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 USP22Q9UPT9 525 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 GRXCR2A6NFK2 248 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 NOP56O00567 594 aaKnown RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 NME4O00746 187 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms