RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 UMODL1-AS1Q8N2C9 162 aa11.48□□□□□ -0.57
C4orf3-201ENST00000399075 PELI3Q8N2H9 469 aa11.48□□□□□ -0.57
C4orf3-201ENST00000399075 TSPAN17Q96FV3 270 aa11.48□□□□□ -0.57
C4orf3-201ENST00000399075 CATSPER2Q96P56 530 aa11.48□□□□□ -0.57
C4orf3-201ENST00000399075 TMEM209Q96SK2 561 aa11.48□□□□□ -0.57
C4orf3-201ENST00000399075 OMDQ99983 421 aa11.48□□□□□ -0.57
C4orf3-201ENST00000399075 UPF3AQ9H1J1 476 aaKnown RBP11.48□□□□□ -0.57
C4orf3-201ENST00000399075 VPS45Q9NRW7 570 aa11.48□□□□□ -0.57
C4orf3-201ENST00000399075 UTP6Q9NYH9 597 aaKnown RBP11.48□□□□□ -0.57
C4orf3-201ENST00000399075 HS3ST4Q9Y661 456 aa11.48□□□□□ -0.57
C4orf3-201ENST00000399075 COPG1Q9Y678 874 aaKnown RBP11.48□□□□□ -0.57
C4orf3-201ENST00000399075 MYO16Q9Y6X6 1858 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 INPPL1O15357 1258 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 AP1G1O43747 822 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 PEX11BO96011 259 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 JUNP05412 331 aaKnown RBP11.47□□□□□ -0.57
C4orf3-201ENST00000399075 LEPRP48357 1165 aaKnown RBP11.47□□□□□ -0.57
C4orf3-201ENST00000399075 NDST2P52849 883 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 MLLT6P55198 1093 aaPredicted RBP11.47□□□□□ -0.57
C4orf3-201ENST00000399075 WNT3AP56704 352 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 TNK2Q07912 1038 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 AGAP9Q5VTM2 703 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 MSANTD2Q6P1R3 559 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 TRIM67Q6ZTA4 783 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 CHSY3Q70JA7 882 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 SPATA2LQ8IUW3 424 aaPredicted RBP11.47□□□□□ -0.57
C4orf3-201ENST00000399075 ST13P4Q8IZP2 240 aaPredicted RBP11.47□□□□□ -0.57
C4orf3-201ENST00000399075 AFAP1L2Q8N4X5 818 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 CCNYL1Q8N7R7 359 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 CATSPER1Q8NEC5 780 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 CEP70Q8NHQ1 597 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 ZFAND2BQ8WV99 257 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 C17orf50Q8WW18 174 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 UPF1Q92900 1129 aaKnown RBP eCLIP11.47□□□□□ -0.571e-7■■■■□ 21.6
C4orf3-201ENST00000399075 MOCOSQ96EN8 888 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 IMP4Q96G21 291 aaKnown RBP11.47□□□□□ -0.57
C4orf3-201ENST00000399075 CDRT15Q96T59 188 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 POMKQ9H5K3 350 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 WDR41Q9HAD4 459 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 NDFIP2Q9NV92 336 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 IPO11Q9UI26 975 aaKnown RBP11.47□□□□□ -0.57
C4orf3-201ENST00000399075 PADI3Q9ULW8 664 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 PLXNA3P51805 1871 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 MSI1O43347 362 aaKnown RBP11.47□□□□□ -0.57
C4orf3-201ENST00000399075 POMCP01189 267 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 SLC2A3P11169 496 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 ALDH1A3P47895 512 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 PSMD8P48556 350 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 PGGT1BP53609 377 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 NKX3-2P78367 333 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 FLOT2Q14254 428 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 GNASQ5JWF2 1037 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 NXNQ6DKJ4 435 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 C17orf99Q6UX52 265 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.47□□□□□ -0.57
C4orf3-201ENST00000399075 EFCAB3Q8N7B9 438 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 ICA1LQ8NDH6 482 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 HIPK4Q8NE63 616 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 EML4Q9HC35 981 aaKnown RBP11.47□□□□□ -0.57
C4orf3-201ENST00000399075 SFMBT1Q9UHJ3 866 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 PCDHB8Q9UN66 801 aa11.47□□□□□ -0.57
C4orf3-201ENST00000399075 TCAF2A6NFQ2 919 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 MGEA5O60502 916 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 BCAS2O75934 225 aaPredicted RBP11.46□□□□□ -0.57
C4orf3-201ENST00000399075 CELF2O95319 508 aaKnown RBP11.46□□□□□ -0.57
C4orf3-201ENST00000399075 PENKP01210 267 aaPredicted RBP11.46□□□□□ -0.57
C4orf3-201ENST00000399075 RBP1P09455 135 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 CD1EP15812 388 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 ME2P23368 584 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 SLC26A3P40879 764 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 RENBPP51606 427 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 SEPT6Q14141 434 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 TAF1CQ15572 869 aaPredicted RBP11.46□□□□□ -0.57
C4orf3-201ENST00000399075 PAN2Q504Q3 1202 aaKnown RBP11.46□□□□□ -0.57
C4orf3-201ENST00000399075 TMEM198Q66K66 360 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 GALNT15Q8N3T1 639 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 NOL6Q9H6R4 1146 aaKnown RBP11.46□□□□□ -0.57
C4orf3-201ENST00000399075 ACSS2Q9NR19 701 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 TLR6Q9Y2C9 796 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 DTNAQ9Y4J8 743 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 CAPNS1P04632 268 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 LTA4HP09960 611 aaKnown RBP11.46□□□□□ -0.57
C4orf3-201ENST00000399075 ZCCHC18P0CG32 403 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 XRCC1P18887 633 aaPredicted RBP11.46□□□□□ -0.57
C4orf3-201ENST00000399075 CD52P31358 61 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 GRIK1P39086 918 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 CHRNA4P43681 627 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 GJA8P48165 433 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 SERPINH1P50454 418 aaKnown RBP11.46□□□□□ -0.57
C4orf3-201ENST00000399075 SULT2A1Q06520 285 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 ART3Q13508 389 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 CEACAM7Q14002 265 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 MAPRE2Q15555 327 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 LRRC36Q1X8D7 754 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 MMEL1Q495T6 779 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 RARS2Q5T160 578 aaKnown RBP11.46□□□□□ -0.57
C4orf3-201ENST00000399075 KLC3Q6P597 504 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 CXCL17Q6UXB2 119 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 C14orf80Q86SX3 495 aa11.46□□□□□ -0.57
C4orf3-201ENST00000399075 ZNF683Q8IZ20 524 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms