RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 NEMP2A6NFY4 417 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 KRIT1O00522 736 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 NEMP1O14524 444 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 FPGTO14772 594 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 EPHB6O15197 1021 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 AP1G1O43747 822 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 USP12O75317 370 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 CSO75390 466 aaKnown RBP9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 LRIG2O94898 1065 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 CSF2P04141 144 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 CYP1A1P04798 512 aaPredicted RBP9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 MPOP05164 745 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 UGT2B4P06133 528 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 PLEKP08567 350 aaPredicted RBP9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 ITIH2P19823 946 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 MMP8P22894 467 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 SDC4P31431 198 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 RABIFP47224 123 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 POLR2FP61218 127 aaKnown RBP9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 CDR2Q01850 454 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 NRG1Q02297 640 aaPredicted RBP9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 EIF2B5Q13144 721 aaKnown RBP9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 PDE1CQ14123 709 aaPredicted RBP9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 CDKN3Q16667 212 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 DEFB133Q30KQ1 61 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 ARL13BQ3SXY8 428 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 CRTC2Q53ET0 693 aaPredicted RBP9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 ZNF805Q5CZA5 627 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 ATXN7L2Q5T6C5 722 aaPredicted RBP9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 MANEALQ5VSG8 457 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 ARCQ7LC44 396 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 ZNF354CQ86Y25 554 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 SPACA3Q8IXA5 215 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 FAM181AQ8N9Y4 354 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 ZNF548Q8NEK5 533 aaPredicted RBP9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 IFI44Q8TCB0 444 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 LMX1AQ8TE12 382 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 FAM172AQ8WUF8 416 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 ISG20Q96AZ6 181 aaKnown RBP9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 KLHL32Q96NJ5 620 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 FCRL3Q96P31 734 aaPredicted RBP9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 LENG8Q96PV6 779 aaPredicted RBP9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 PCDHB18PQ96TA0 734 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 DUSP23Q9BVJ7 150 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 ABCG4Q9H172 646 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 NUP62CLQ9H1M0 184 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 TCEAL2Q9H3H9 227 aaPredicted RBP9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 NLRC4Q9NPP4 1024 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 TMEM248Q9NWD8 314 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 HPCAL4Q9UM19 191 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 NEU3Q9UQ49 428 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 ANKRD36A6QL64 1941 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 UNC13CQ8NB66 2214 aa9.95□□□□□ -0.82
NIFKP1-201ENST00000398317 A0A1B0GTH6 734 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 CPED1A4D0V7 1026 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 C2CD4BA6NLJ0 364 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 AQP9O43315 295 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 TSPAN6O43657 245 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 RAMP2O60895 175 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 GSRP00390 522 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 NME1P15531 152 aaKnown RBP9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 TGM2P21980 687 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 EEF1GP26641 437 aaKnown RBP9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 SOX5P35711 763 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 ETFBP38117 255 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 MAPKAPK2P49137 400 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 DUSP3P51452 185 aaPredicted RBP9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 HDAC4P56524 1084 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 JAM2P57087 298 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 SNRPD1P62314 119 aaKnown RBP9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 GABREP78334 506 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 TLE3Q04726 772 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 C1orf61Q13536 156 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 POLD3Q15054 466 aaPredicted RBP9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 KRT31Q15323 416 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 MYLK3Q32MK0 819 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 GUSBP11Q6P575 273 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 CRTC1Q6UUV9 634 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 EFL1Q7Z2Z2 1120 aaKnown RBP9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 VPS36Q86VN1 386 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 PARGQ86W56 976 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 ZNF677Q86XU0 584 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 RBFAQ8N0V3 343 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 PYROXD2Q8N2H3 581 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 TSEN2Q8NCE0 465 aaKnown RBP9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 OR2AP1Q8NGE2 309 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 MAPK15Q8TD08 544 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 RAB7BQ96AH8 199 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 VOPP1Q96AW1 172 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 TBC1D31Q96DN5 1066 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 DEPDC7Q96QD5 511 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 LGMNQ99538 433 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 KLC2Q9H0B6 622 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 MAGEH1Q9H213 219 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 FAM207AQ9NSI2 230 aaPredicted RBP9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 CHMP5Q9NZZ3 219 aa9.94□□□□□ -0.82
NIFKP1-201ENST00000398317 PIEZO2Q9H5I5 2752 aa9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 SETXQ7Z333 2677 aaKnown RBP9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 CASC3O15234 703 aaKnown RBP9.93□□□□□ -0.82
NIFKP1-201ENST00000398317 ATXN7O15265 892 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms