RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 CAMK1DQ8IU85 385 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 AFAP1L2Q8N4X5 818 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 BCL7CQ8WUZ0 217 aaPredicted RBP16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 SEMA4BQ9NPR2 832 aaPredicted RBP16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 TLR9Q9NR96 1032 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 NCKIPSDQ9NZQ3 722 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 YIPF1Q9Y548 306 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 STAMBPO95630 424 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 AKT1P31749 480 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 TRIP4Q15650 581 aaPredicted RBP16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 RAB41Q5JT25 222 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 DEFB107AQ8IZN7 70 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 FUBP3Q96I24 572 aaKnown RBP eCLIP16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 CASD1Q96PB1 797 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 UPF3AQ9H1J1 476 aaKnown RBP16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 OSBPL2Q9H1P3 480 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 SEPT3Q9UH03 358 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 SOX13Q9UN79 622 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 PKP3Q9Y446 797 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 TCAF1Q9Y4C2 921 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 USP1O94782 785 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 OAZ2O95190 189 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 SEC24AO95486 1093 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 MZF1P28698 734 aaPredicted RBP16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 RAB10P61026 200 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 ICE2Q659A1 982 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 KYAT3Q6YP21 454 aaKnown RBP16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 YTHDF3Q7Z739 585 aaKnown RBP16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 ARHGAP12Q8IWW6 846 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 CALML6Q8TD86 181 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 PPWD1Q96BP3 646 aaKnown RBP16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 COG4Q9H9E3 785 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 TCF7L2Q9NQB0 619 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 HBS1LQ9Y450 684 aaKnown RBP16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 PLXNA1Q9UIW2 1896 aa16.01■□□□□ 0.15
SMARCD1-202ENST00000394963 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16■□□□□ 0.15
SMARCD1-202ENST00000394963 CNTFP26441 200 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 CTNNB1P35222 781 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 AIF1P55008 147 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 SIRPB2Q5JXA9 342 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 STXBP5Q5T5C0 1151 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 RNF43Q68DV7 783 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 RNF38Q9H0F5 515 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 CSNK1G1Q9HCP0 422 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 MOCS1Q9NZB8 636 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 UNC80Q8N2C7 3258 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 RFPL2O75678 378 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 SIX3O95343 332 aaPredicted RBP16■□□□□ 0.15
SMARCD1-202ENST00000394963 CYBBP04839 570 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 HNRNPDQ14103 355 aaKnown RBP16■□□□□ 0.15
SMARCD1-202ENST00000394963 TMCO4Q5TGY1 634 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 AGAP9Q5VTM2 703 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 SNX30Q5VWJ9 437 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 FAM126BQ8IXS8 530 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 HEXDCQ8WVB3 486 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 N4BP2L2Q92802 583 aaPredicted RBP16■□□□□ 0.15
SMARCD1-202ENST00000394963 C11orf84Q9BUA3 381 aaPredicted RBP16■□□□□ 0.15
SMARCD1-202ENST00000394963 RHOJQ9H4E5 214 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 SPG21Q9NZD8 308 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 RNF112Q9ULX5 631 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 BTRCQ9Y297 605 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 MTF2Q9Y483 593 aaPredicted RBP16■□□□□ 0.15
SMARCD1-202ENST00000394963 BTN3A1O00481 513 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 BTKQ06187 659 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 CEP97Q8IW35 865 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 IGSF21Q96ID5 467 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 MRGPRX2Q96LB1 330 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 NOP53Q9NZM5 478 aaKnown RBP16■□□□□ 0.15
SMARCD1-202ENST00000394963 CRLS1Q9UJA2 301 aa16■□□□□ 0.15
SMARCD1-202ENST00000394963 ATP5HO75947 161 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 GOT2P00505 430 aaKnown RBP15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 CYP11A1P05108 521 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 ATF6P18850 670 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 PTPN4P29074 926 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 GALNTL6Q49A17 601 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 RINLQ6ZS11 566 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 SLC25A51Q9H1U9 297 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 MARCH4Q9P2E8 410 aaPredicted RBP15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 MID2Q9UJV3 735 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 ATG2BQ96BY7 2078 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 SMIM24O75264 130 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 PIK3CGP48736 1102 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 NEK3P51956 506 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 KPNA2P52292 529 aaKnown RBP15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 STX1BP61266 288 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 MARK2Q7KZI7 788 aaKnown RBP15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 SPATA24Q86W54 205 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 CMTM8Q8IZV2 173 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 PCDH20Q8N6Y1 951 aaKnown RBP15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 NT5C3BQ969T7 300 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 ZDHHC6Q9H6R6 413 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 MARCH5Q9NX47 278 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 CD84Q9UIB8 345 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 VWA7Q9Y334 891 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 HMX2A2RU54 273 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 NEDD8-MDP1E9PL57 170 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 COPAP53621 1224 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 EMC10Q5UCC4 262 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 CD300LGQ6UXG3 332 aa15.99■□□□□ 0.15
SMARCD1-202ENST00000394963 SNX32Q86XE0 403 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms