RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 ZBTB44Q8NCP5 570 aa16.46■□□□□ 0.23
TMEM53-203ENST00000372242 TDRD1Q9BXT4 1180 aaKnown RBP16.46■□□□□ 0.23
TMEM53-203ENST00000372242 DKK3Q9UBP4 350 aa16.46■□□□□ 0.23
TMEM53-203ENST00000372242 FZD4Q9ULV1 537 aa16.46■□□□□ 0.23
TMEM53-203ENST00000372242 PRR23AA6NEV1 266 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 ZNF500O60304 480 aaPredicted RBP16.45■□□□□ 0.22
TMEM53-203ENST00000372242 RPP40O75818 363 aaKnown RBP16.45■□□□□ 0.22
TMEM53-203ENST00000372242 PGLSO95336 258 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 PRLP01236 227 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 CD6P30203 668 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 RPL22P35268 128 aaKnown RBP16.45■□□□□ 0.22
TMEM53-203ENST00000372242 ACTN2P35609 894 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 ABL2P42684 1182 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 SEMG2Q02383 582 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 PTPRRQ15256 657 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 UGP2Q16851 508 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 ARMC12Q5T9G4 340 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 BRAT1Q6PJG6 821 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 DEFB119Q8N690 84 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 SPATA4Q8NEY3 305 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 SPACA7Q96KW9 195 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 MLPHQ9BV36 600 aaPredicted RBP16.45■□□□□ 0.22
TMEM53-203ENST00000372242 BTBD1Q9H0C5 482 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 PCDH9Q9HC56 1237 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 WSB2Q9NYS7 404 aaPredicted RBP16.45■□□□□ 0.22
TMEM53-203ENST00000372242 FAM153AQ9UHL3 310 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 GGT7Q9UJ14 662 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 ITM2BQ9Y287 266 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 R4GN57 208 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 TSPAN11A1L157 253 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 FZD6O60353 706 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 FNTAP49354 379 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 VPS41P49754 854 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 ADPRHP54922 357 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 WNT3AP56704 352 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 LMNB2Q03252 620 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 SFSWAPQ12872 951 aaKnown RBP16.45■□□□□ 0.22
TMEM53-203ENST00000372242 PARP6Q2NL67 630 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 KDELC1Q6UW63 502 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 IPMKQ8NFU5 416 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 HCAR2Q8TDS4 363 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 GAB3Q8WWW8 586 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 FAM131CQ96AQ9 280 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 SMIM14Q96QK8 99 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 GPR174Q9BXC1 333 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 MRFAP1Q9Y605 127 aa16.45■□□□□ 0.22
TMEM53-203ENST00000372242 USP34Q70CQ2 3546 aa16.44■□□□□ 0.22
TMEM53-203ENST00000372242 A8MX80 341 aa16.44■□□□□ 0.22
TMEM53-203ENST00000372242 UPK3BL1B0FP48 263 aa16.44■□□□□ 0.22
TMEM53-203ENST00000372242 UPK3BL2E5RIL1 263 aa16.44■□□□□ 0.22
TMEM53-203ENST00000372242 SPINT1O43278 529 aa16.44■□□□□ 0.22
TMEM53-203ENST00000372242 MAP3K13O43283 966 aa16.44■□□□□ 0.22
TMEM53-203ENST00000372242 CPP00450 1065 aa16.44■□□□□ 0.22
TMEM53-203ENST00000372242 XPAP23025 273 aaPredicted RBP16.44■□□□□ 0.22
TMEM53-203ENST00000372242 OXTRP30559 389 aa16.44■□□□□ 0.22
TMEM53-203ENST00000372242 C2orf54Q08AI8 447 aa16.44■□□□□ 0.22
TMEM53-203ENST00000372242 OLIG2Q13516 323 aa16.44■□□□□ 0.22
TMEM53-203ENST00000372242 GALNT3Q14435 633 aa16.44■□□□□ 0.22
TMEM53-203ENST00000372242 LPCAT1Q8NF37 534 aa16.44■□□□□ 0.22
TMEM53-203ENST00000372242 PIH1D2Q8WWB5 315 aa16.44■□□□□ 0.22
TMEM53-203ENST00000372242 MRGPRX2Q96LB1 330 aa16.44■□□□□ 0.22
TMEM53-203ENST00000372242 PRRX2Q99811 253 aa16.44■□□□□ 0.22
TMEM53-203ENST00000372242 ETNK1Q9HBU6 452 aa16.44■□□□□ 0.22
TMEM53-203ENST00000372242 PCDH12Q9NPG4 1184 aa16.44■□□□□ 0.22
TMEM53-203ENST00000372242 PAK5Q9P286 719 aa16.44■□□□□ 0.22
TMEM53-203ENST00000372242 PCDHGA2Q9Y5H1 932 aa16.44■□□□□ 0.22
TMEM53-203ENST00000372242 CCDC188H7C350 402 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 PLRG1O43660 514 aaKnown RBP16.43■□□□□ 0.22
TMEM53-203ENST00000372242 ANXA9O76027 345 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 SEMA4FO95754 770 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 KRT14P02533 472 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 CTPS1P17812 591 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 CA4P22748 312 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 TERF1P54274 439 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 GEMP55040 296 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 POLR2LP62875 67 aaKnown RBP16.43■□□□□ 0.22
TMEM53-203ENST00000372242 FAM193AP78312 1265 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 RPL6Q02878 288 aaKnown RBP16.43■□□□□ 0.22
TMEM53-203ENST00000372242 CDK18Q07002 472 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 CCDC15Q0P6D6 951 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 SPARCL1Q14515 664 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 PRPSAP1Q14558 356 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 IFT43Q96FT9 208 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 TRIB3Q96RU7 358 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 KRT12Q99456 494 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 C6orf106Q9H6K1 298 aaPredicted RBP16.43■□□□□ 0.22
TMEM53-203ENST00000372242 SGK2Q9HBY8 427 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 RAB6BQ9NRW1 208 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 VPS45Q9NRW7 570 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 PCYOX1Q9UHG3 505 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 NEU2Q9Y3R4 380 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 FADS3Q9Y5Q0 445 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 PLXND1Q9Y4D7 1925 aa16.43■□□□□ 0.22
TMEM53-203ENST00000372242 TBC1D3DA0A087WVF3 549 aa16.42■□□□□ 0.22
TMEM53-203ENST00000372242 TBC1D3IA0A087WXS9 549 aa16.42■□□□□ 0.22
TMEM53-203ENST00000372242 TBC1D3EA0A087X179 549 aa16.42■□□□□ 0.22
TMEM53-203ENST00000372242 TBC1D3KA0A087X1G2 549 aa16.42■□□□□ 0.22
TMEM53-203ENST00000372242 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.42■□□□□ 0.22
TMEM53-203ENST00000372242 A0A0U1RQS6 177 aa16.42■□□□□ 0.22
TMEM53-203ENST00000372242 TBC1D3FA6NER0 549 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms