RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 TP63Q9H3D4 680 aaPredicted RBP12.8□□□□□ -0.36
VAMP1-201ENST00000361716 PLEKHA5Q9HAU0 1116 aa12.8□□□□□ -0.36
VAMP1-201ENST00000361716 ZBTB26Q9HCK0 441 aa12.8□□□□□ -0.36
VAMP1-201ENST00000361716 SCHIP1Q9P0W5 487 aaPredicted RBP12.8□□□□□ -0.36
VAMP1-201ENST00000361716 RAP2CQ9Y3L5 183 aa12.8□□□□□ -0.36
VAMP1-201ENST00000361716 TLL2Q9Y6L7 1015 aa12.8□□□□□ -0.36
VAMP1-201ENST00000361716 A0A087WZ62 844 aa12.8□□□□□ -0.36
VAMP1-201ENST00000361716 UBDO15205 165 aa12.8□□□□□ -0.36
VAMP1-201ENST00000361716 TGM2P21980 687 aa12.8□□□□□ -0.36
VAMP1-201ENST00000361716 CES1P23141 567 aa12.8□□□□□ -0.36
VAMP1-201ENST00000361716 SLC7A1P30825 629 aa12.8□□□□□ -0.36
VAMP1-201ENST00000361716 GMPSP49915 693 aaPredicted RBP12.8□□□□□ -0.36
VAMP1-201ENST00000361716 ZNF143P52747 638 aaPredicted RBP12.8□□□□□ -0.36
VAMP1-201ENST00000361716 HSDL1Q3SXM5 330 aa12.8□□□□□ -0.36
VAMP1-201ENST00000361716 TMEM236Q5W0B7 351 aa12.8□□□□□ -0.36
VAMP1-201ENST00000361716 MAP1SQ66K74 1059 aaPredicted RBP12.8□□□□□ -0.36
VAMP1-201ENST00000361716 REP15Q6BDI9 236 aa12.8□□□□□ -0.36
VAMP1-201ENST00000361716 DEPDC4Q8N2C3 294 aa12.8□□□□□ -0.36
VAMP1-201ENST00000361716 SLCO4A1Q96BD0 722 aa12.8□□□□□ -0.36
VAMP1-201ENST00000361716 SPATA33Q96N06 139 aa12.8□□□□□ -0.36
VAMP1-201ENST00000361716 FDXACB1Q9BRP7 624 aaPredicted RBP12.8□□□□□ -0.36
VAMP1-201ENST00000361716 NUDT5Q9UKK9 219 aa12.8□□□□□ -0.36
VAMP1-201ENST00000361716 ERVK-11Q9UQG0 969 aa12.8□□□□□ -0.36
VAMP1-201ENST00000361716 PRELID1Q9Y255 219 aa12.8□□□□□ -0.36
VAMP1-201ENST00000361716 A8MV72 311 aaPredicted RBP12.79□□□□□ -0.36
VAMP1-201ENST00000361716 RNF103O00237 685 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 ASNA1O43681 348 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 SNAP91O60641 907 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 DEAF1O75398 565 aaPredicted RBP12.79□□□□□ -0.36
VAMP1-201ENST00000361716 KRT8P05787 483 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 UBA1P22314 1058 aaKnown RBP12.79□□□□□ -0.36
VAMP1-201ENST00000361716 CNTFP26441 200 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 GABRB3P28472 473 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 SLC12A2P55011 1212 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 INPP5AQ14642 412 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 KIZQ2M2Z5 673 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 USP41Q3LFD5 358 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 BOLA3Q53S33 107 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 PPP1R26Q5T8A7 1209 aaPredicted RBP12.79□□□□□ -0.36
VAMP1-201ENST00000361716 AKAP14Q86UN6 197 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 POC5Q8NA72 575 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 ZFP90Q8TF47 636 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 FAR2Q96K12 515 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 MED10Q9BTT4 135 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 NT5C1AQ9BXI3 368 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 FRMD8P1Q9BZ68 369 aaPredicted RBP12.79□□□□□ -0.36
VAMP1-201ENST00000361716 SIK2Q9H0K1 926 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 CHRAC1Q9NRG0 131 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 GGA3Q9NZ52 723 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 TBC1D14Q9P2M4 693 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 ANKRD34BA5PLL1 514 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 SYCE1LA8MT33 242 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 CCRL2O00421 344 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 SNPHO15079 494 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 DAB1O75553 588 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 ATP6V1B2P21281 511 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 STX1BP61266 288 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 ZNF846Q147U1 533 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 SPCS2Q15005 226 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 PDK2Q15119 407 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 ITPKCQ96DU7 683 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 MFSD3Q96ES6 412 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 CERS2Q96G23 380 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 PCDHGA7Q9Y5G6 932 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 MICAL3Q7RTP6 2002 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 TADA2AO75478 443 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 DDNO94850 711 aaPredicted RBP12.79□□□□□ -0.36
VAMP1-201ENST00000361716 ITGBL1O95965 494 aaPredicted RBP12.79□□□□□ -0.36
VAMP1-201ENST00000361716 POLR2IP36954 125 aaKnown RBP12.79□□□□□ -0.36
VAMP1-201ENST00000361716 PRKAA1Q13131 559 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 FRA10AC1Q70Z53 315 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 CMASQ8NFW8 434 aaPredicted RBP12.79□□□□□ -0.36
VAMP1-201ENST00000361716 DNAJB14Q8TBM8 379 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 HTR3CQ8WXA8 447 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 SNX19Q92543 992 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 APBB2Q92870 758 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 CELF6Q96J87 481 aaKnown RBP12.79□□□□□ -0.36
VAMP1-201ENST00000361716 DMRTB1Q96MA1 342 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 LHPPQ9H008 270 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 MINDY3Q9H8M7 445 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 FBRSL1Q9HCM7 1045 aaKnown RBP12.79□□□□□ -0.36
VAMP1-201ENST00000361716 MYOZ2Q9NPC6 264 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 BFARQ9NZS9 450 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 DKK3Q9UBP4 350 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 GIMAP2Q9UG22 337 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 PSME2Q9UL46 239 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 GPSM3Q9Y4H4 160 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 SNX5Q9Y5X3 404 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 COL4A5P29400 1685 aa12.79□□□□□ -0.36
VAMP1-201ENST00000361716 CHRM3P20309 590 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 OR2T34Q8NGX1 318 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 OR2T3Q8NH03 318 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 ACMSDQ8TDX5 336 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 LRCH3Q96II8 777 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 RNF145Q96MT1 663 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 MUS81Q96NY9 551 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 CITED4Q96RK1 184 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 TSPAN18Q96SJ8 248 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 CHST12Q9NRB3 414 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms