RNA–Protein interactions for RNA: ENST00000342644.9

SNX21-201, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-201ENST00000342644 XAB2Q9HCS7 855 aaKnown RBP20.84■□□□□ 0.93
SNX21-201ENST00000342644 PPM1HQ9ULR3 514 aa20.84■□□□□ 0.93
SNX21-201ENST00000342644 MMP17Q9ULZ9 603 aa20.84■□□□□ 0.93
SNX21-201ENST00000342644 RPL26L1Q9UNX3 145 aaKnown RBP20.84■□□□□ 0.93
SNX21-201ENST00000342644 NCOR1O75376 2440 aa20.84■□□□□ 0.93
SNX21-201ENST00000342644 FAM170BA6NMN3 283 aa20.83■□□□□ 0.93
SNX21-201ENST00000342644 SYNCRIPO60506 623 aaKnown RBP20.83■□□□□ 0.93
SNX21-201ENST00000342644 NDST3O95803 873 aa20.83■□□□□ 0.93
SNX21-201ENST00000342644 PRLP01236 227 aa20.83■□□□□ 0.93
SNX21-201ENST00000342644 CTSLP07711 333 aa20.83■□□□□ 0.93
SNX21-201ENST00000342644 HLA-DPA1P20036 260 aa20.83■□□□□ 0.93
SNX21-201ENST00000342644 GKP32189 559 aa20.83■□□□□ 0.93
SNX21-201ENST00000342644 GPS2Q13227 327 aa20.83■□□□□ 0.93
SNX21-201ENST00000342644 STARD3Q14849 445 aa20.83■□□□□ 0.93
SNX21-201ENST00000342644 UBXN2BQ14CS0 331 aa20.83■□□□□ 0.93
SNX21-201ENST00000342644 SYCP2LQ5T4T6 812 aa20.83■□□□□ 0.93
SNX21-201ENST00000342644 GDPD4Q6W3E5 623 aa20.83■□□□□ 0.93
SNX21-201ENST00000342644 ZNF534Q76KX8 674 aa20.83■□□□□ 0.93
SNX21-201ENST00000342644 ZCCHC9Q8N567 271 aaKnown RBP20.83■□□□□ 0.93
SNX21-201ENST00000342644 CAVIN3Q969G5 261 aa20.83■□□□□ 0.93
SNX21-201ENST00000342644 IFT43Q96FT9 208 aa20.83■□□□□ 0.93
SNX21-201ENST00000342644 SERPINB12Q96P63 405 aa20.83■□□□□ 0.93
SNX21-201ENST00000342644 FICDQ9BVA6 458 aa20.83■□□□□ 0.93
SNX21-201ENST00000342644 PHACTR1Q9C0D0 580 aa20.83■□□□□ 0.93
SNX21-201ENST00000342644 CD248Q9HCU0 757 aa20.83■□□□□ 0.93
SNX21-201ENST00000342644 CASS4Q9NQ75 786 aa20.83■□□□□ 0.93
SNX21-201ENST00000342644 NFU1Q9UMS0 254 aa20.83■□□□□ 0.93
SNX21-201ENST00000342644 MTF2Q9Y483 593 aaPredicted RBP20.83■□□□□ 0.93
SNX21-201ENST00000342644 A0A1W2PQF6 199 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 PPFIA2O75334 1257 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 LEFTY1O75610 366 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 PGLSO95336 258 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 PIGNO95427 931 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 AGTP01019 485 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 MYBL2P10244 700 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 HOXB2P14652 356 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 WASP42768 502 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 MAGEA3P43357 314 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 CDH17Q12864 832 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 SPARCL1Q14515 664 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 SLC1A5Q15758 541 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 PCSK7Q16549 785 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 ARSIQ5FYB1 569 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 ARMC12Q5T9G4 340 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 DENND5AQ6IQ26 1287 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 CAND1Q86VP6 1230 aaKnown RBP20.83■□□□□ 0.92
SNX21-201ENST00000342644 CLDN23Q96B33 292 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 ADGRE3Q9BY15 652 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 FOXQ1Q9C009 403 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 TSPYL1Q9H0U9 437 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 RSPH9Q9H1X1 276 aaPredicted RBP20.83■□□□□ 0.92
SNX21-201ENST00000342644 DKK3Q9UBP4 350 aa20.83■□□□□ 0.92
SNX21-201ENST00000342644 MTRF1LQ9UGC7 380 aaKnown RBP20.83■□□□□ 0.92
SNX21-201ENST00000342644 TRIOO75962 3097 aa20.82■□□□□ 0.92
SNX21-201ENST00000342644 TSPAN11A1L157 253 aa20.82■□□□□ 0.92
SNX21-201ENST00000342644 DCXO43602 365 aa20.82■□□□□ 0.92
SNX21-201ENST00000342644 ATG13O75143 517 aa20.82■□□□□ 0.92
SNX21-201ENST00000342644 FGF1P05230 155 aa20.82■□□□□ 0.92
SNX21-201ENST00000342644 ATXN1LP0C7T5 689 aaKnown RBP20.82■□□□□ 0.92
SNX21-201ENST00000342644 GRIA1P42261 906 aa20.82■□□□□ 0.92
SNX21-201ENST00000342644 PJA1Q8NG27 643 aa20.82■□□□□ 0.92
SNX21-201ENST00000342644 OR2T3Q8NH03 318 aa20.82■□□□□ 0.92
SNX21-201ENST00000342644 NEUROG2Q9H2A3 272 aa20.82■□□□□ 0.92
SNX21-201ENST00000342644 CHKBQ9Y259 395 aa20.82■□□□□ 0.92
SNX21-201ENST00000342644 ANKRD66B4E2M5 251 aa20.81■□□□□ 0.92
SNX21-201ENST00000342644 USP12O75317 370 aa20.81■□□□□ 0.92
SNX21-201ENST00000342644 UGT2B4P06133 528 aa20.81■□□□□ 0.92
SNX21-201ENST00000342644 PDHA1P08559 390 aa20.81■□□□□ 0.92
SNX21-201ENST00000342644 ALADP13716 330 aa20.81■□□□□ 0.92
SNX21-201ENST00000342644 RPS9P46781 194 aaKnown RBP20.81■□□□□ 0.92
SNX21-201ENST00000342644 OLIG2Q13516 323 aa20.81■□□□□ 0.92
SNX21-201ENST00000342644 CASP8Q14790 479 aa20.81■□□□□ 0.92
SNX21-201ENST00000342644 ZNF805Q5CZA5 627 aa20.81■□□□□ 0.92
SNX21-201ENST00000342644 BRAT1Q6PJG6 821 aa20.81■□□□□ 0.92
SNX21-201ENST00000342644 PDIK1LQ8N165 341 aa20.81■□□□□ 0.92
SNX21-201ENST00000342644 OR52K1Q8NGK4 314 aa20.81■□□□□ 0.92
SNX21-201ENST00000342644 PIP4K2CQ8TBX8 421 aa20.81■□□□□ 0.92
SNX21-201ENST00000342644 GRIN3AQ8TCU5 1115 aa20.81■□□□□ 0.92
SNX21-201ENST00000342644 PIH1D2Q8WWB5 315 aa20.81■□□□□ 0.92
SNX21-201ENST00000342644 FMO2Q99518 471 aa20.81■□□□□ 0.92
SNX21-201ENST00000342644 FUT8Q9BYC5 575 aa20.81■□□□□ 0.92
SNX21-201ENST00000342644 VIPAS39Q9H9C1 493 aa20.81■□□□□ 0.92
SNX21-201ENST00000342644 PPIL1Q9Y3C6 166 aa20.81■□□□□ 0.92
SNX21-201ENST00000342644 PCDHB9Q9Y5E1 797 aa20.81■□□□□ 0.92
SNX21-201ENST00000342644 E7ESA3 106 aa20.8■□□□□ 0.92
SNX21-201ENST00000342644 C1QTNF3-AMACRE9PGA6 284 aa20.8■□□□□ 0.92
SNX21-201ENST00000342644 GOLGA8MH3BSY2 632 aa20.8■□□□□ 0.92
SNX21-201ENST00000342644 EIF3HO15372 352 aaKnown RBP eCLIP20.8■□□□□ 0.92
SNX21-201ENST00000342644 RNASEH1O60930 286 aaKnown RBP20.8■□□□□ 0.92
SNX21-201ENST00000342644 GRIA4P48058 902 aa20.8■□□□□ 0.92
SNX21-201ENST00000342644 COPAP53621 1224 aa20.8■□□□□ 0.92
SNX21-201ENST00000342644 ARL4CP56559 192 aa20.8■□□□□ 0.92
SNX21-201ENST00000342644 POLR2LP62875 67 aaKnown RBP20.8■□□□□ 0.92
SNX21-201ENST00000342644 SIRPB2Q5JXA9 342 aa20.8■□□□□ 0.92
SNX21-201ENST00000342644 FAM46CQ5VWP2 391 aa20.8■□□□□ 0.92
SNX21-201ENST00000342644 ARMC3Q5W041 872 aa20.8■□□□□ 0.92
SNX21-201ENST00000342644 KIAA1211LQ6NV74 962 aa20.8■□□□□ 0.92
SNX21-201ENST00000342644 Q6ZS52 159 aa20.8■□□□□ 0.92
SNX21-201ENST00000342644 CEP128Q6ZU80 1094 aa20.8■□□□□ 0.92
SNX21-201ENST00000342644 SYT13Q7L8C5 426 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms