RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 PRKCGP05129 697 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 PIRTP0C851 137 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 KRT15P19012 456 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 NR1D1P20393 614 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 GKP32189 559 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 AP1S1P61966 158 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 DLG2Q15700 870 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 TNFAIP8L3Q5GJ75 292 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 RALGPS1Q5JS13 557 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 ESRP1Q6NXG1 681 aaKnown RBP14.81□□□□□ -0.04
CBX3-201ENST00000337620 SLC26A11Q86WA9 606 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 RASSF3Q86WH2 238 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 ETFBKMTQ8IXQ9 262 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 LPCAT1Q8NF37 534 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 OR2AP1Q8NGE2 309 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 PTCD2Q8WV60 388 aaKnown RBP14.81□□□□□ -0.04
CBX3-201ENST00000337620 RPP25Q9BUL9 199 aaKnown RBP14.81□□□□□ -0.04
CBX3-201ENST00000337620 UGT1A7Q9HAW7 530 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 UGT1A10Q9HAW8 530 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 UGT1A8Q9HAW9 530 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 C20orf96Q9NUD7 363 aaPredicted RBP14.81□□□□□ -0.04
CBX3-201ENST00000337620 GTSE1Q9NYZ3 720 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 DEC1Q9P2X7 70 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 ERVW-1Q9UQF0 538 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 PRLP01236 227 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 CA4P22748 312 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 GDI1P31150 447 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 SNRPD1P62314 119 aaKnown RBP14.81□□□□□ -0.04
CBX3-201ENST00000337620 MGAT5Q09328 741 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 MSLNQ13421 630 aaPredicted RBP14.81□□□□□ -0.04
CBX3-201ENST00000337620 RUNX3Q13761 415 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 COL19A1Q14993 1142 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 C22orf39Q6P5X5 142 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 EXOC3L1Q86VI1 746 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 CAMK1DQ8IU85 385 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 CPA6Q8N4T0 437 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 PAF1Q8N7H5 531 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 LRCH3Q96II8 777 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 NECTIN4Q96NY8 510 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 ADGRE3Q9BY15 652 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 MRM3Q9HC36 420 aaKnown RBP14.81□□□□□ -0.04
CBX3-201ENST00000337620 ZFATQ9P243 1243 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 SLC17A6Q9P2U8 582 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 SLC2A6Q9UGQ3 507 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 CD207Q9UJ71 328 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 USP15Q9Y4E8 981 aaPredicted RBP14.81□□□□□ -0.04
CBX3-201ENST00000337620 PCDHB9Q9Y5E1 797 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 GOLGA8TH3BQL2 631 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 PIGNO95427 931 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 ALADP13716 330 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 NNMTP40261 264 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 CSNK1DP48730 415 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 ATP1A2P50993 1020 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 BCL2L1Q07817 233 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 MESP2Q0VG99 397 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 RASA2Q15283 850 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 CNGA3Q16281 694 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 GAB4Q2WGN9 574 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 HSP90AA5PQ58FG0 334 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 GRAMD4Q6IC98 578 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 KCNMB4Q86W47 210 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 ISG20Q96AZ6 181 aaKnown RBP14.8□□□□□ -0.04
CBX3-201ENST00000337620 RANBP9Q96S59 729 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 SLC27A6Q9Y2P4 619 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 MYLKQ15746 1914 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 BPTFQ12830 3046 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.8□□□□□ -0.04
CBX3-201ENST00000337620 ATP5BP06576 529 aaKnown RBP14.8□□□□□ -0.04
CBX3-201ENST00000337620 SLC8A1P32418 973 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 MAPK8P45983 427 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 EPHB1P54762 984 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 KDSRQ06136 332 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 CCDC85BQ15834 202 aaPredicted RBP14.8□□□□□ -0.04
CBX3-201ENST00000337620 TAOK1Q7L7X3 1001 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 SRRM1Q8IYB3 904 aaKnown RBP14.8□□□□□ -0.04
CBX3-201ENST00000337620 PCDH20Q8N6Y1 951 aaKnown RBP14.8□□□□□ -0.04
CBX3-201ENST00000337620 WFIKKN2Q8TEU8 576 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 TRMT61BQ9BVS5 477 aaKnown RBP14.8□□□□□ -0.04
CBX3-201ENST00000337620 CEP44Q9C0F1 390 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.8□□□□□ -0.042e-7■■■□□ 18.1
CBX3-201ENST00000337620 PRKAG3Q9UGI9 489 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 ANKRD36A6QL64 1941 aa14.8□□□□□ -0.04
CBX3-201ENST00000337620 IQANK1A0A1B0GTG1 560 aa14.79□□□□□ -0.04
CBX3-201ENST00000337620 ANKRD66B4E2M5 251 aa14.79□□□□□ -0.04
CBX3-201ENST00000337620 ECI2O75521 394 aa14.79□□□□□ -0.04
CBX3-201ENST00000337620 VAPBO95292 243 aa14.79□□□□□ -0.04
CBX3-201ENST00000337620 DLDP09622 509 aaKnown RBP14.79□□□□□ -0.04
CBX3-201ENST00000337620 PAMP19021 973 aa14.79□□□□□ -0.04
CBX3-201ENST00000337620 PPP2R2AP63151 447 aa14.79□□□□□ -0.04
CBX3-201ENST00000337620 MYLK3Q32MK0 819 aa14.79□□□□□ -0.04
CBX3-201ENST00000337620 CARD16Q5EG05 197 aa14.79□□□□□ -0.04
CBX3-201ENST00000337620 TSTD2Q5T7W7 516 aa14.79□□□□□ -0.04
CBX3-201ENST00000337620 ARMC12Q5T9G4 340 aa14.79□□□□□ -0.04
CBX3-201ENST00000337620 Q6ZVU0 165 aa14.79□□□□□ -0.04
CBX3-201ENST00000337620 BRSK1Q8TDC3 778 aa14.79□□□□□ -0.04
CBX3-201ENST00000337620 SMIM14Q96QK8 99 aa14.79□□□□□ -0.04
CBX3-201ENST00000337620 ATP13A3Q9H7F0 1226 aa14.79□□□□□ -0.04
CBX3-201ENST00000337620 IARS2Q9NSE4 1012 aaKnown RBP14.79□□□□□ -0.04
CBX3-201ENST00000337620 BRWD1Q9NSI6 2320 aa14.79□□□□□ -0.04
CBX3-201ENST00000337620 ELOVL2Q9NXB9 296 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms