RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 LPCAT1Q8NF37 534 aa22.72■■□□□ 1.23
IRF3-201ENST00000309877 OR2AP1Q8NGE2 309 aa22.72■■□□□ 1.23
IRF3-201ENST00000309877 OR6K2Q8NGY2 324 aa22.72■■□□□ 1.23
IRF3-201ENST00000309877 DCAKDQ8WVC6 231 aa22.72■■□□□ 1.23
IRF3-201ENST00000309877 FGF14Q92915 247 aa22.72■■□□□ 1.23
IRF3-201ENST00000309877 PRKAG3Q9UGI9 489 aa22.72■■□□□ 1.23
IRF3-201ENST00000309877 SLCO3A1Q9UIG8 710 aa22.72■■□□□ 1.23
IRF3-201ENST00000309877 USP15Q9Y4E8 981 aaPredicted RBP22.72■■□□□ 1.23
IRF3-201ENST00000309877 ECI2O75521 394 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 ZNF821O75541 412 aaPredicted RBP22.71■■□□□ 1.23
IRF3-201ENST00000309877 ATP5BP06576 529 aaKnown RBP22.71■■□□□ 1.23
IRF3-201ENST00000309877 KRT15P19012 456 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 NR1D1P20393 614 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 SLC6A11P48066 632 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 BCL2L1Q07817 233 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 TRAF2Q12933 501 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 LAMB3Q13751 1172 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 MTSS1LQ765P7 747 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 TAOK1Q7L7X3 1001 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 PCDH20Q8N6Y1 951 aaKnown RBP22.71■■□□□ 1.23
IRF3-201ENST00000309877 BLOC1S5Q8TDH9 187 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 ZNF778Q96MU6 729 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 C20orf96Q9NUD7 363 aaPredicted RBP22.71■■□□□ 1.23
IRF3-201ENST00000309877 BNIP3LO60238 219 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 GSRP00390 522 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 PRLP01236 227 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 ASLP04424 464 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 ERVK-10P10266 1014 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 PAMP19021 973 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 GDI1P31150 447 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 MSLNQ13421 630 aaPredicted RBP22.71■■□□□ 1.23
IRF3-201ENST00000309877 NAB1Q13506 487 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 PAF1Q8N7H5 531 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 TTC8Q8TAM2 541 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 CYB5D2Q8WUJ1 264 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 TRMT61BQ9BVS5 477 aaKnown RBP22.71■■□□□ 1.23
IRF3-201ENST00000309877 ATP13A3Q9H7F0 1226 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 ZFATQ9P243 1243 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 SLC8A2Q9UPR5 921 aa22.71■■□□□ 1.23
IRF3-201ENST00000309877 IQANK1A0A1B0GTG1 560 aa22.7■■□□□ 1.22
IRF3-201ENST00000309877 SOX1O00570 391 aaPredicted RBP22.7■■□□□ 1.22
IRF3-201ENST00000309877 PDHA1P08559 390 aa22.7■■□□□ 1.22
IRF3-201ENST00000309877 GYS2P54840 703 aa22.7■■□□□ 1.22
IRF3-201ENST00000309877 SMAD1Q15797 465 aaKnown RBP22.7■■□□□ 1.22
IRF3-201ENST00000309877 GAB4Q2WGN9 574 aa22.7■■□□□ 1.22
IRF3-201ENST00000309877 CARD16Q5EG05 197 aa22.7■■□□□ 1.22
IRF3-201ENST00000309877 PDPK2PQ6A1A2 396 aa22.7■■□□□ 1.22
IRF3-201ENST00000309877 ESRP1Q6NXG1 681 aaKnown RBP22.7■■□□□ 1.22
IRF3-201ENST00000309877 NLRP9Q7RTR0 991 aa22.7■■□□□ 1.22
IRF3-201ENST00000309877 SORCS1Q8WY21 1168 aa22.7■■□□□ 1.22
IRF3-201ENST00000309877 IL1RAPL1Q9NZN1 696 aa22.7■■□□□ 1.22
IRF3-201ENST00000309877 H3BQ06 376 aaPredicted RBP22.69■■□□□ 1.22
IRF3-201ENST00000309877 DLDP09622 509 aaKnown RBP22.69■■□□□ 1.22
IRF3-201ENST00000309877 EPHB1P54762 984 aa22.69■■□□□ 1.22
IRF3-201ENST00000309877 RAD51Q06609 339 aa22.69■■□□□ 1.22
IRF3-201ENST00000309877 MYLK3Q32MK0 819 aa22.69■■□□□ 1.22
IRF3-201ENST00000309877 TSTD2Q5T7W7 516 aa22.69■■□□□ 1.22
IRF3-201ENST00000309877 ARMC12Q5T9G4 340 aa22.69■■□□□ 1.22
IRF3-201ENST00000309877 LGSNQ5TDP6 509 aa22.69■■□□□ 1.22
IRF3-201ENST00000309877 MARK2Q7KZI7 788 aaKnown RBP22.69■■□□□ 1.22
IRF3-201ENST00000309877 EXOC3L1Q86VI1 746 aa22.69■■□□□ 1.22
IRF3-201ENST00000309877 KCNMB4Q86W47 210 aa22.69■■□□□ 1.22
IRF3-201ENST00000309877 CAMK1DQ8IU85 385 aa22.69■■□□□ 1.22
IRF3-201ENST00000309877 BRSK1Q8TDC3 778 aa22.69■■□□□ 1.22
IRF3-201ENST00000309877 MYLIPQ8WY64 445 aa22.69■■□□□ 1.22
IRF3-201ENST00000309877 SUSD6Q92537 303 aa22.69■■□□□ 1.22
IRF3-201ENST00000309877 ELOVL2Q9NXB9 296 aa22.69■■□□□ 1.22
IRF3-201ENST00000309877 GTSE1Q9NYZ3 720 aa22.69■■□□□ 1.22
IRF3-201ENST00000309877 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.69■■□□□ 1.22
IRF3-201ENST00000309877 EPS15L1Q9UBC2 864 aa22.69■■□□□ 1.22
IRF3-201ENST00000309877 ZNF180Q9UJW8 692 aa22.69■■□□□ 1.22
IRF3-201ENST00000309877 PCDHB9Q9Y5E1 797 aa22.69■■□□□ 1.22
IRF3-201ENST00000309877 PAPSS2O95340 614 aaPredicted RBP22.68■■□□□ 1.22
IRF3-201ENST00000309877 SRPRAP08240 638 aaKnown RBP22.68■■□□□ 1.22
IRF3-201ENST00000309877 PIRTP0C851 137 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 SP100P23497 879 aaPredicted RBP22.68■■□□□ 1.22
IRF3-201ENST00000309877 RECQLP46063 649 aaPredicted RBP22.68■■□□□ 1.22
IRF3-201ENST00000309877 ST8SIA6P61647 398 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 KDSRQ06136 332 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 CNGA3Q16281 694 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 HSP90AA5PQ58FG0 334 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 ARFGAP2Q8N6H7 521 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 MYO19Q96H55 970 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 RPP25Q9BUL9 199 aaKnown RBP22.68■■□□□ 1.22
IRF3-201ENST00000309877 TREX1Q9NSU2 369 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 TXNDC16Q9P2K2 825 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 SLC2A6Q9UGQ3 507 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 MIA3Q5JRA6 1907 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 ANKRD66B4E2M5 251 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 UGT1A9O60656 530 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 SOCS5O75159 536 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 FAM155BO75949 473 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 VAPBO95292 243 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 PIGNO95427 931 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 POP4O95707 220 aaKnown RBP22.68■■□□□ 1.22
IRF3-201ENST00000309877 SERPINA4P29622 427 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 GKP32189 559 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 PPP2R2AP63151 447 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 Q6ZVU0 165 aa22.68■■□□□ 1.22
IRF3-201ENST00000309877 SRRM1Q8IYB3 904 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms