RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CCNB2O95067 398 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 LDOC1O95751 146 aaPredicted RBP13.48□□□□□ -0.25
TRIM56-201ENST00000306085 THOP1P52888 689 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 GFOD2Q3B7J2 385 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 MARC1Q5VT66 337 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 ZNF730Q6ZMV8 503 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 PTCH1Q13635 1447 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.48□□□□□ -0.25
TRIM56-201ENST00000306085 TFRCP02786 760 aaKnown RBP13.48□□□□□ -0.25
TRIM56-201ENST00000306085 ELK3P41970 407 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 CASP9P55211 416 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 ADIGQ0VDE8 80 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 AAGABQ6PD74 315 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 L7N2F9 121 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 URODP06132 367 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 NR2F6P10588 404 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 VAMP2P63027 116 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 LINGO2Q7L985 606 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 ZFP28Q8NHY6 868 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 ZDHHC6Q9H6R6 413 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 PCDHGB3Q9Y5G1 929 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 TPP1O14773 563 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 ANXA5P08758 320 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 CYP11B1P15538 503 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 MTA1Q13330 715 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 CERKQ8TCT0 537 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 FAIM2Q9BWQ8 316 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 TIMMDC1Q9NPL8 285 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 ZNF226Q9NYT6 803 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 DMTF1Q9Y222 760 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 ZNF780BQ9Y6R6 833 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 RIPK2O43353 540 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 MED24O75448 989 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 PSKH1P11801 424 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 PPP1R26Q5T8A7 1209 aaPredicted RBP13.47□□□□□ -0.25
TRIM56-201ENST00000306085 IRGMA1A4Y4 181 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 NOL4O94818 638 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 RPL14P50914 215 aaKnown RBP13.47□□□□□ -0.25
TRIM56-201ENST00000306085 PPP3R1P63098 170 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 THG1LQ9NWX6 298 aaKnown RBP13.47□□□□□ -0.25
TRIM56-201ENST00000306085 RBAK-RBAKDNI3L0D1 243 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 CDH17Q12864 832 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 BAATQ14032 418 aaPredicted RBP13.47□□□□□ -0.25
TRIM56-201ENST00000306085 TC2NQ8N9U0 490 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 FAM126AQ9BYI3 521 aaPredicted RBP13.47□□□□□ -0.25
TRIM56-201ENST00000306085 ITGB1P05556 798 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 SSTP61278 116 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 PARGQ86W56 976 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 GRPEL2Q8TAA5 225 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 EDEM1Q92611 657 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 THRSPQ92748 146 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 C12orf66Q96MD2 445 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 SMURF1Q9HCE7 757 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 CPDO75976 1380 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 CHST10O43529 356 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 AVILO75366 819 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 VAPBO95292 243 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 CES1P23141 567 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 HUNKP57058 714 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 PAPD7Q5XG87 772 aaKnown RBP13.47□□□□□ -0.25
TRIM56-201ENST00000306085 FOXRED2Q8IWF2 684 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 STARD7Q9NQZ5 370 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 H3BNH8 94 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 STOMP27105 288 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 UBAP2LQ14157 1087 aaKnown RBP13.47□□□□□ -0.25
TRIM56-201ENST00000306085 ALG10Q5BKT4 473 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 GATAD2BQ8WXI9 593 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 HDAC2Q92769 488 aaKnown RBP13.47□□□□□ -0.25
TRIM56-201ENST00000306085 RDH8Q9NYR8 311 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 QSOX1O00391 747 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 PON1P27169 355 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 ACTR3P61158 418 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 AMPD2Q01433 879 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 TAF1CQ15572 869 aaPredicted RBP13.47□□□□□ -0.25
TRIM56-201ENST00000306085 MAPKAPK3Q16644 382 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 CNSTQ6PJW8 725 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 PANX3Q96QZ0 392 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 TUBGCP5Q96RT8 1024 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 ZNF700Q9H0M5 742 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 SLAIN2Q9P270 581 aa13.47□□□□□ -0.25
TRIM56-201ENST00000306085 C17orf102A2RUQ5 167 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 FAM86C2PA6NEL3 165 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 AP5Z1O43299 807 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 NUAK1O60285 661 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 F9P00740 461 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 NAE1Q13564 534 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 RHEBQ15382 184 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 HECTD3Q5T447 861 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 HNRNPLLQ8WVV9 542 aaKnown RBP13.46□□□□□ -0.25
TRIM56-201ENST00000306085 SYN2Q92777 582 aaPredicted RBP13.46□□□□□ -0.25
TRIM56-201ENST00000306085 FAM105AQ9NUU6 356 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 RNF181Q9P0P0 153 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 SLC10A7Q0GE19 358 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 RTL4Q6ZR62 310 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 TMC3Q7Z5M5 1100 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 DUSP10Q9Y6W6 482 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 KANTRA0A1W2PQU2 76 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 ITPKBP27987 946 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 OR2L2Q8NH16 312 aa13.46□□□□□ -0.25
TRIM56-201ENST00000306085 RXFP2Q8WXD0 754 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms