RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 SPIBQ01892 262 aa12.18□□□□□ -0.46
SRRM4-201ENST00000267260 ZNF280DQ6N043 979 aa12.18□□□□□ -0.46
SRRM4-201ENST00000267260 SLC4A11Q8NBS3 891 aa12.18□□□□□ -0.46
SRRM4-201ENST00000267260 GALNT6Q8NCL4 622 aa12.18□□□□□ -0.46
SRRM4-201ENST00000267260 PIWIL2Q8TC59 973 aaKnown RBP12.18□□□□□ -0.46
SRRM4-201ENST00000267260 KIAA1683Q9H0B3 1180 aa12.18□□□□□ -0.46
SRRM4-201ENST00000267260 MSH4O15457 936 aa12.18□□□□□ -0.46
SRRM4-201ENST00000267260 GCATO75600 419 aa12.18□□□□□ -0.46
SRRM4-201ENST00000267260 TBX4P57082 545 aa12.18□□□□□ -0.46
SRRM4-201ENST00000267260 SLC4A9Q96Q91 983 aa12.18□□□□□ -0.46
SRRM4-201ENST00000267260 MRPL57Q9BQC6 102 aaKnown RBP12.18□□□□□ -0.46
SRRM4-201ENST00000267260 ZIK1Q3SY52 487 aaPredicted RBP12.17□□□□□ -0.46
SRRM4-201ENST00000267260 WDR59Q6PJI9 974 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 CHRDL2Q6WN34 429 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 PTCHD4Q6ZW05 846 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 RNF148Q8N7C7 305 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 SELENOMQ8WWX9 145 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 SLC47A1Q96FL8 570 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 SMURF2Q9HAU4 748 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 FAM86C2PA6NEL3 165 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 GTPBP1O00178 669 aaKnown RBP12.17□□□□□ -0.46
SRRM4-201ENST00000267260 RAB15P59190 212 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 RIPPLY1Q0D2K3 151 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 ANXA8L1Q5VT79 327 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 FSTL5Q8N475 847 aaPredicted RBP12.17□□□□□ -0.46
SRRM4-201ENST00000267260 CCDC54Q8NEL0 328 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 ZNF354BQ96LW1 612 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 CIPCQ9C0C6 399 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 SAMD4AQ9UPU9 718 aaKnown RBP12.17□□□□□ -0.46
SRRM4-201ENST00000267260 PCDHGB3Q9Y5G1 929 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 ACTL7BQ9Y614 415 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 PSMA1P25786 263 aaKnown RBP12.17□□□□□ -0.46
SRRM4-201ENST00000267260 ELK3P41970 407 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 PTPRNQ16849 979 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 RFTN2Q52LD8 501 aaPredicted RBP12.17□□□□□ -0.46
SRRM4-201ENST00000267260 CNSTQ6PJW8 725 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 PIGKQ92643 395 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 DNAJC5BQ9UF47 199 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 SCAF8Q9UPN6 1271 aaKnown RBP12.17□□□□□ -0.46
SRRM4-201ENST00000267260 GSTT2BP0CG30 244 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 PDX1P52945 283 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 PKNOX1P55347 436 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 BCL2L1Q07817 233 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 E2F2Q14209 437 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 TAF1CQ15572 869 aaPredicted RBP12.17□□□□□ -0.46
SRRM4-201ENST00000267260 CWF19L1Q69YN2 538 aaKnown RBP12.17□□□□□ -0.46
SRRM4-201ENST00000267260 LRRC70Q7Z2Q7 622 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 ZC3H7AQ8IWR0 971 aaKnown RBP12.17□□□□□ -0.46
SRRM4-201ENST00000267260 NKAPQ8N5F7 415 aaKnown RBP12.17□□□□□ -0.46
SRRM4-201ENST00000267260 AGAP11Q8TF27 550 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 LENG9Q96B70 501 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 PHB2Q99623 299 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 FNDC11Q9BVV2 318 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 PLA2G12BQ9BX93 195 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 HPF1Q9NWY4 346 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 SPG21Q9NZD8 308 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 PSMD13Q9UNM6 376 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 ENTPD3O75355 529 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 UNC5CO95185 931 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 ICAM1P05362 532 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 SERPINA6P08185 405 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 NR2F1P10589 423 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 CYP11B2P19099 503 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 TMCO6Q96DC7 493 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 AIF1LQ9BQI0 150 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 ZNF350Q9GZX5 532 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 EXO5Q9H790 373 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 NDOR1Q9UHB4 597 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 MKLN1Q9UL63 735 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 CTXN3Q4LDR2 81 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 ACTL9Q8TC94 416 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 LMAN2LQ9H0V9 348 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 VPS45Q9NRW7 570 aa12.17□□□□□ -0.46
SRRM4-201ENST00000267260 PRAMEF33A0A0G2JMD5 474 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 DHRS12A0PJE2 317 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 MPZL2O60487 215 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 PRAMEF10O60809 474 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 KDM4BO94953 1096 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 MGAT1P26572 445 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 MIIPQ5JXC2 388 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 RASAL3Q86YV0 1011 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 HM13Q8TCT9 377 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 POLR1EQ9GZS1 481 aaKnown RBP12.16□□□□□ -0.46
SRRM4-201ENST00000267260 FBXO10Q9UK96 956 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.16□□□□□ -0.46
SRRM4-201ENST00000267260 LEMD2Q8NC56 503 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 ZNF548Q8NEK5 533 aaPredicted RBP12.16□□□□□ -0.46
SRRM4-201ENST00000267260 SLC12A8A0AV02 714 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 IFNA16P05015 189 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 ANXA5P08758 320 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 GJA1P17302 382 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 CDC25CP30307 473 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 ADIGQ0VDE8 80 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 CRY1Q16526 586 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 PFKFB4Q16877 469 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 C15orf59Q2T9L4 293 aaPredicted RBP12.16□□□□□ -0.46
SRRM4-201ENST00000267260 ATCAYQ86WG3 371 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 KLHL5Q96PQ7 755 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 CDH7Q9ULB5 785 aa12.16□□□□□ -0.46
SRRM4-201ENST00000267260 WDR37Q9Y2I8 494 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms