RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 VWA7Q9Y334 891 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 MAGEA10P43363 369 aaPredicted RBP19.08■□□□□ 0.64
PTPRE-201ENST00000254667 POLD2P49005 469 aa19.08■□□□□ 0.64
PTPRE-201ENST00000254667 TYW3Q6IPR3 259 aaKnown RBP19.08■□□□□ 0.64
PTPRE-201ENST00000254667 HDAC10Q969S8 669 aa19.08■□□□□ 0.64
PTPRE-201ENST00000254667 SPATA5L1Q9BVQ7 753 aa19.08■□□□□ 0.64
PTPRE-201ENST00000254667 MFSD1Q9H3U5 465 aa19.08■□□□□ 0.64
PTPRE-201ENST00000254667 H3BN98 237 aa19.08■□□□□ 0.64
PTPRE-201ENST00000254667 TSNQ15631 228 aaKnown RBP19.08■□□□□ 0.64
PTPRE-201ENST00000254667 ZNHIT3Q15649 155 aaPredicted RBP19.08■□□□□ 0.64
PTPRE-201ENST00000254667 MON1BQ7L1V2 547 aa19.08■□□□□ 0.64
PTPRE-201ENST00000254667 MTFMTQ96DP5 389 aaKnown RBP19.08■□□□□ 0.64
PTPRE-201ENST00000254667 MTERF3Q96E29 417 aa19.08■□□□□ 0.64
PTPRE-201ENST00000254667 ACBD6Q9BR61 282 aa19.08■□□□□ 0.64
PTPRE-201ENST00000254667 RHOJQ9H4E5 214 aa19.08■□□□□ 0.64
PTPRE-201ENST00000254667 SMNDC1O75940 238 aaKnown RBP eCLIP19.07■□□□□ 0.64
PTPRE-201ENST00000254667 LCA5LO95447 670 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 HSMCR30P0CW71 290 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 RHOQP17081 205 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 AMD1P17707 334 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 PTPN9P43378 593 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 RNF148Q8N7C7 305 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 C1orf127Q8N9H9 656 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 SLC4A11Q8NBS3 891 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 RP9Q8TA86 221 aaKnown RBP19.07■□□□□ 0.64
PTPRE-201ENST00000254667 NFAT5O94916 1531 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 SHPRHQ149N8 1683 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 FAM237BA0A1B0GVD1 139 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 PSMB9P28065 219 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 KCNA10Q16322 511 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 FGD2Q7Z6J4 655 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 ZNF276Q8N554 614 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 SLC12A4Q9UP95 1085 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 MYRFQ9Y2G1 1151 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 PCDHB9Q9Y5E1 797 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 KCNE2Q9Y6J6 123 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 MC4RP32245 332 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 PRMT2P55345 433 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 RGL4Q8IZJ4 473 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 OSBPL6Q9BZF3 934 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 ZNF232Q9UNY5 417 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 REXO2Q9Y3B8 237 aaKnown RBP19.07■□□□□ 0.64
PTPRE-201ENST00000254667 RGSL1A5PLK6 1076 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 POU5F1Q01860 360 aaKnown RBP19.07■□□□□ 0.64
PTPRE-201ENST00000254667 GALNT3Q14435 633 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 MAPKAPK3Q16644 382 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 FGFBP2Q9BYJ0 223 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 EPB41L4BQ9H329 900 aa19.07■□□□□ 0.64
PTPRE-201ENST00000254667 DYTNA2CJ06 578 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 MDM4O15151 490 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 DDX3YO15523 660 aaKnown RBP19.06■□□□□ 0.64
PTPRE-201ENST00000254667 PEX11AO75192 247 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 ZNF549Q6P9A3 640 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 NET1Q7Z628 596 aaPredicted RBP19.06■□□□□ 0.64
PTPRE-201ENST00000254667 XPR1Q9UBH6 696 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 BCLAF3A2AJT9 711 aaKnown RBP19.06■□□□□ 0.64
PTPRE-201ENST00000254667 NT5C1B-RDH14C9J2C7 533 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 SEPT4O43236 478 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 VAV1P15498 845 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 ELNP15502 786 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 DEPDC7Q96QD5 511 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 HNRNPABQ99729 332 aaKnown RBP19.06■□□□□ 0.64
PTPRE-201ENST00000254667 GOLGA2P5Q9HBQ8 144 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 ARIH1Q9Y4X5 557 aaPredicted RBP19.06■□□□□ 0.64
PTPRE-201ENST00000254667 TRIM24O15164 1050 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 SLC35G4P0C7Q5 338 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 COX4I1P13073 169 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 MYL12AP19105 171 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 INO80DQ53TQ3 878 aaPredicted RBP19.06■□□□□ 0.64
PTPRE-201ENST00000254667 CLYBLQ8N0X4 340 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 VMP1Q96GC9 406 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 SNX27Q96L92 541 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 BRD9Q9H8M2 597 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 KRT75O95678 551 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 DLGAP3O95886 979 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 R3HCC1LQ7Z5L2 792 aaKnown RBP19.06■□□□□ 0.64
PTPRE-201ENST00000254667 CAMK1DQ8IU85 385 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 CCDC103Q8IW40 242 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 TBCDQ9BTW9 1192 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 B3GNT5Q9BYG0 378 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 RIBC2Q9H4K1 309 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 ZNHIT2Q9UHR6 403 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 RWDD3Q9Y3V2 267 aa19.06■□□□□ 0.64
PTPRE-201ENST00000254667 C5orf60A6NFR6 353 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 SCAMP3O14828 347 aaKnown RBP19.05■□□□□ 0.64
PTPRE-201ENST00000254667 AVILO75366 819 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 FSBPO95073 299 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 KELP23276 732 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 HGSNATQ68CP4 663 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 RORBQ92753 470 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 PTCD3Q96EY7 689 aaKnown RBP19.05■□□□□ 0.64
PTPRE-201ENST00000254667 EXOC2Q96KP1 924 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 SPAG4Q9NPE6 437 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 COL20A1Q9P218 1284 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 CFAP97Q9P2B7 532 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 GPSM3Q9Y4H4 160 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 PCDHB1Q9Y5F3 818 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 TRAFD1O14545 582 aaPredicted RBP19.05■□□□□ 0.64
PTPRE-201ENST00000254667 AZIN1O14977 448 aa19.05■□□□□ 0.64
PTPRE-201ENST00000254667 UNC5CO95185 931 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms