RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 CCNG1P51959 295 aa21.83■■□□□ 1.09
CLN6-201ENST00000249806 RCN1Q15293 331 aa21.83■■□□□ 1.09
CLN6-201ENST00000249806 KIAA0408Q6ZU52 694 aa21.83■■□□□ 1.09
CLN6-201ENST00000249806 CILP2Q8IUL8 1156 aa21.83■■□□□ 1.09
CLN6-201ENST00000249806 ULK2Q8IYT8 1036 aa21.83■■□□□ 1.09
CLN6-201ENST00000249806 LSMEM2Q8N112 164 aa21.83■■□□□ 1.09
CLN6-201ENST00000249806 SHKBP1Q8TBC3 707 aa21.83■■□□□ 1.09
CLN6-201ENST00000249806 CALML6Q8TD86 181 aa21.83■■□□□ 1.09
CLN6-201ENST00000249806 ZNF512Q96ME7 567 aaPredicted RBP21.83■■□□□ 1.09
CLN6-201ENST00000249806 TMEM175Q9BSA9 504 aa21.83■■□□□ 1.09
CLN6-201ENST00000249806 OSBPL1AQ9BXW6 950 aa21.83■■□□□ 1.09
CLN6-201ENST00000249806 MRPL9Q9BYD2 267 aaKnown RBP21.83■■□□□ 1.09
CLN6-201ENST00000249806 POLR1EQ9GZS1 481 aaKnown RBP21.83■■□□□ 1.09
CLN6-201ENST00000249806 SUDS3Q9H7L9 328 aaPredicted RBP21.83■■□□□ 1.09
CLN6-201ENST00000249806 COMMD8Q9NX08 183 aa21.83■■□□□ 1.09
CLN6-201ENST00000249806 NEMP2A6NFY4 417 aa21.83■■□□□ 1.08
CLN6-201ENST00000249806 NEMP1O14524 444 aa21.83■■□□□ 1.08
CLN6-201ENST00000249806 LDB2O43679 373 aa21.83■■□□□ 1.08
CLN6-201ENST00000249806 LMNAP02545 664 aaKnown RBP21.83■■□□□ 1.08
CLN6-201ENST00000249806 PEX6Q13608 980 aa21.83■■□□□ 1.08
CLN6-201ENST00000249806 DNAL1Q4LDG9 190 aa21.83■■□□□ 1.08
CLN6-201ENST00000249806 CCNYL1Q8N7R7 359 aa21.83■■□□□ 1.08
CLN6-201ENST00000249806 OR7D4Q8NG98 312 aa21.83■■□□□ 1.08
CLN6-201ENST00000249806 C2orf15Q8WU43 125 aaKnown RBP21.83■■□□□ 1.08
CLN6-201ENST00000249806 ZNF570Q96NI8 536 aa21.83■■□□□ 1.08
CLN6-201ENST00000249806 TTLL2Q9BWV7 592 aa21.83■■□□□ 1.08
CLN6-201ENST00000249806 NACA2Q9H009 215 aa21.83■■□□□ 1.08
CLN6-201ENST00000249806 MRPL46Q9H2W6 279 aaKnown RBP21.83■■□□□ 1.08
CLN6-201ENST00000249806 IGSF5Q9NSI5 407 aa21.83■■□□□ 1.08
CLN6-201ENST00000249806 MARCH4Q9P2E8 410 aaPredicted RBP21.83■■□□□ 1.08
CLN6-201ENST00000249806 SLC7A8Q9UHI5 535 aa21.83■■□□□ 1.08
CLN6-201ENST00000249806 DNMT3LQ9UJW3 386 aa21.83■■□□□ 1.08
CLN6-201ENST00000249806 ZFP37Q9Y6Q3 630 aaPredicted RBP21.83■■□□□ 1.08
CLN6-201ENST00000249806 HOXA2O43364 376 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 PAPSS2O95340 614 aaPredicted RBP21.82■■□□□ 1.08
CLN6-201ENST00000249806 CD1EP15812 388 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 DNAJB1P25685 340 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 SESN3P58005 492 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 GALNT3Q14435 633 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 ZNF235Q14590 738 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 RALGPS1Q5JS13 557 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 TMCO4Q5TGY1 634 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 DEFB128Q7Z7B8 93 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 DTX3LQ8TDB6 740 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 ZNF296Q8WUU4 475 aaPredicted RBP21.82■■□□□ 1.08
CLN6-201ENST00000249806 UNC93B1Q9H1C4 597 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 PDFQ9HBH1 243 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 TCF7L2Q9NQB0 619 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 ARL5AQ9Y689 179 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 A0A087X1B8 175 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 ACSL4O60488 711 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 PSMG1O95456 288 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 PIRTP0C851 137 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 EPHA3P29320 983 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 ALDH7A1P49419 539 aaKnown RBP21.82■■□□□ 1.08
CLN6-201ENST00000249806 KPNA1P52294 538 aaPredicted RBP21.82■■□□□ 1.08
CLN6-201ENST00000249806 COPAP53621 1224 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 RPS24P62847 133 aaKnown RBP21.82■■□□□ 1.08
CLN6-201ENST00000249806 PRAMEP78395 509 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 DENND1CQ8IV53 801 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 TXNDC5Q8NBS9 432 aaKnown RBP21.82■■□□□ 1.08
CLN6-201ENST00000249806 BLOC1S5Q8TDH9 187 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 IFT43Q96FT9 208 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 TBATAQ96M53 351 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 VN1R3Q9BXE9 311 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 NUF2Q9BZD4 464 aa21.82■■□□□ 1.08
CLN6-201ENST00000249806 HDAC3O15379 428 aa21.81■■□□□ 1.08
CLN6-201ENST00000249806 GRID2O43424 1007 aa21.81■■□□□ 1.08
CLN6-201ENST00000249806 ZMPSTE24O75844 475 aa21.81■■□□□ 1.08
CLN6-201ENST00000249806 ATN1P54259 1190 aaPredicted RBP21.81■■□□□ 1.08
CLN6-201ENST00000249806 TSNAXIP1Q2TAA8 658 aa21.81■■□□□ 1.08
CLN6-201ENST00000249806 SLC8B1Q6J4K2 584 aa21.81■■□□□ 1.08
CLN6-201ENST00000249806 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.81■■□□□ 1.081e-6■■■■■ 32.3
CLN6-201ENST00000249806 SH3RF2Q8TEC5 729 aa21.81■■□□□ 1.08
CLN6-201ENST00000249806 PANX3Q96QZ0 392 aa21.81■■□□□ 1.08
CLN6-201ENST00000249806 MRPL57Q9BQC6 102 aaKnown RBP21.81■■□□□ 1.08
CLN6-201ENST00000249806 PPP1R12CQ9BZL4 782 aa21.81■■□□□ 1.08
CLN6-201ENST00000249806 GKN1Q9NS71 199 aa21.81■■□□□ 1.08
CLN6-201ENST00000249806 MTF2Q9Y483 593 aaPredicted RBP21.81■■□□□ 1.08
CLN6-201ENST00000249806 CHD5Q8TDI0 1954 aa21.81■■□□□ 1.08
CLN6-201ENST00000249806 A0A088AWK7 358 aa21.8■■□□□ 1.08
CLN6-201ENST00000249806 SLC7A4O43246 635 aa21.8■■□□□ 1.08
CLN6-201ENST00000249806 JUNP05412 331 aaKnown RBP21.8■■□□□ 1.08
CLN6-201ENST00000249806 GLDCP23378 1020 aa21.8■■□□□ 1.08
CLN6-201ENST00000249806 PRKAA2P54646 552 aa21.8■■□□□ 1.08
CLN6-201ENST00000249806 PRKAA1Q13131 559 aa21.8■■□□□ 1.08
CLN6-201ENST00000249806 ACBD5Q5T8D3 534 aaPredicted RBP21.8■■□□□ 1.08
CLN6-201ENST00000249806 HECTD2Q5U5R9 776 aa21.8■■□□□ 1.08
CLN6-201ENST00000249806 SEL1L3Q68CR1 1132 aa21.8■■□□□ 1.08
CLN6-201ENST00000249806 IL31Q6EBC2 164 aa21.8■■□□□ 1.08
CLN6-201ENST00000249806 LRRC43Q8N309 656 aa21.8■■□□□ 1.08
CLN6-201ENST00000249806 GPAMQ9HCL2 828 aa21.8■■□□□ 1.08
CLN6-201ENST00000249806 CRYL1Q9Y2S2 319 aa21.8■■□□□ 1.08
CLN6-201ENST00000249806 SEC24AO95486 1093 aa21.8■■□□□ 1.08
CLN6-201ENST00000249806 S1PR4O95977 384 aa21.8■■□□□ 1.08
CLN6-201ENST00000249806 CCDC166P0CW27 439 aa21.8■■□□□ 1.08
CLN6-201ENST00000249806 HOXD9P28356 352 aaPredicted RBP21.8■■□□□ 1.08
CLN6-201ENST00000249806 MAP2K2P36507 400 aa21.8■■□□□ 1.08
CLN6-201ENST00000249806 GNA12Q03113 381 aa21.8■■□□□ 1.08
CLN6-201ENST00000249806 ANKRD49Q8WVL7 239 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms