RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 FAM149AA5PLN7 773 aa18.25■□□□□ 0.51
PFN1-201ENST00000225655 MIF4GDA9UHW6 222 aaKnown RBP18.25■□□□□ 0.51
PFN1-201ENST00000225655 AP1G1O43747 822 aa18.25■□□□□ 0.51
PFN1-201ENST00000225655 PALMO75781 387 aa18.25■□□□□ 0.51
PFN1-201ENST00000225655 HCAR3P49019 387 aa18.25■□□□□ 0.51
PFN1-201ENST00000225655 RPS21P63220 83 aaKnown RBP18.25■□□□□ 0.51
PFN1-201ENST00000225655 ILKQ13418 452 aa18.25■□□□□ 0.51
PFN1-201ENST00000225655 POLD3Q15054 466 aaPredicted RBP18.25■□□□□ 0.51
PFN1-201ENST00000225655 RFX8Q6ZV50 586 aa18.25■□□□□ 0.51
PFN1-201ENST00000225655 PARS2Q7L3T8 475 aaKnown RBP18.25■□□□□ 0.51
PFN1-201ENST00000225655 ABI3BPQ7Z7G0 1075 aa18.25■□□□□ 0.51
PFN1-201ENST00000225655 ZSCAN30Q86W11 494 aa18.25■□□□□ 0.51
PFN1-201ENST00000225655 PYROXD2Q8N2H3 581 aa18.25■□□□□ 0.51
PFN1-201ENST00000225655 UBL4BQ8N7F7 174 aa18.25■□□□□ 0.51
PFN1-201ENST00000225655 PDCD7Q8N8D1 485 aaKnown RBP18.25■□□□□ 0.51
PFN1-201ENST00000225655 TRIM58Q8NG06 486 aa18.25■□□□□ 0.51
PFN1-201ENST00000225655 OR13H1Q8NG92 308 aa18.25■□□□□ 0.51
PFN1-201ENST00000225655 KCTD15Q96SI1 283 aaPredicted RBP18.25■□□□□ 0.51
PFN1-201ENST00000225655 CALN1Q9BXU9 219 aa18.25■□□□□ 0.51
PFN1-201ENST00000225655 TM6SF2Q9BZW4 377 aa18.25■□□□□ 0.51
PFN1-201ENST00000225655 ZDHHC6Q9H6R6 413 aa18.25■□□□□ 0.51
PFN1-201ENST00000225655 FZD3Q9NPG1 666 aa18.25■□□□□ 0.51
PFN1-201ENST00000225655 FADS3Q9Y5Q0 445 aa18.25■□□□□ 0.51
PFN1-201ENST00000225655 APC2O95996 2303 aa18.24■□□□□ 0.51
PFN1-201ENST00000225655 ZFYVE26Q68DK2 2539 aa18.24■□□□□ 0.51
PFN1-201ENST00000225655 LRRD1A4D1F6 860 aa18.24■□□□□ 0.51
PFN1-201ENST00000225655 GRID2IPA4D2P6 1211 aa18.24■□□□□ 0.51
PFN1-201ENST00000225655 TRABD2BA6NFA1 517 aa18.24■□□□□ 0.51
PFN1-201ENST00000225655 ZSCAN5CA6NGD5 496 aaPredicted RBP18.24■□□□□ 0.51
PFN1-201ENST00000225655 KDELR3O43731 214 aa18.24■□□□□ 0.51
PFN1-201ENST00000225655 GSRP00390 522 aa18.24■□□□□ 0.51
PFN1-201ENST00000225655 KRT1P04264 644 aa18.24■□□□□ 0.51
PFN1-201ENST00000225655 TCF4P15884 667 aa18.24■□□□□ 0.51
PFN1-201ENST00000225655 CKMT2P17540 419 aa18.24■□□□□ 0.51
PFN1-201ENST00000225655 CETN2P41208 172 aa18.24■□□□□ 0.51
PFN1-201ENST00000225655 TAS2R40P59535 323 aa18.24■□□□□ 0.51
PFN1-201ENST00000225655 GCNT7Q6ZNI0 430 aa18.24■□□□□ 0.51
PFN1-201ENST00000225655 CYP4V2Q6ZWL3 525 aaPredicted RBP18.24■□□□□ 0.51
PFN1-201ENST00000225655 RTL3Q8N8U3 475 aaKnown RBP18.24■□□□□ 0.51
PFN1-201ENST00000225655 OR2AP1Q8NGE2 309 aa18.24■□□□□ 0.51
PFN1-201ENST00000225655 FEM1CQ96JP0 617 aa18.24■□□□□ 0.51
PFN1-201ENST00000225655 SLC17A9Q9BYT1 436 aa18.24■□□□□ 0.51
PFN1-201ENST00000225655 HYOU1Q9Y4L1 999 aa18.24■□□□□ 0.51
PFN1-201ENST00000225655 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.24■□□□□ 0.51
PFN1-201ENST00000225655 KNTC1P50748 2209 aa18.24■□□□□ 0.51
PFN1-201ENST00000225655 A6NNZ2 444 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 KIF5CO60282 957 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 SDC3O75056 442 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 DGKAP23743 735 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 HNF1BP35680 557 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 CLDN2P57739 230 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 SNRPD1P62314 119 aaKnown RBP18.23■□□□□ 0.51
PFN1-201ENST00000225655 ZNF211Q13398 564 aaPredicted RBP18.23■□□□□ 0.51
PFN1-201ENST00000225655 FGL2Q14314 439 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 CA9Q16790 459 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 PROX2Q3B8N5 592 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 ZNF805Q5CZA5 627 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 VSIG1Q86XK7 387 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 DCP2Q8IU60 420 aaKnown RBP18.23■□□□□ 0.51
PFN1-201ENST00000225655 SLC25A45Q8N413 288 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 RYBPQ8N488 228 aaPredicted RBP18.23■□□□□ 0.51
PFN1-201ENST00000225655 LRRC57Q8N9N7 239 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 OR6K2Q8NGY2 324 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 RAB7BQ96AH8 199 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 VOPP1Q96AW1 172 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 IFT43Q96FT9 208 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 RBM41Q96IZ5 413 aaKnown RBP18.23■□□□□ 0.51
PFN1-201ENST00000225655 ZNF670Q9BS34 389 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 MAK16Q9BXY0 300 aaKnown RBP18.23■□□□□ 0.51
PFN1-201ENST00000225655 NOL6Q9H6R4 1146 aaKnown RBP18.23■□□□□ 0.51
PFN1-201ENST00000225655 PCDH18Q9HCL0 1135 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 GPR27Q9NS67 375 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 LHX6Q9UPM6 363 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 GPSM3Q9Y4H4 160 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 HS3ST3A1Q9Y663 406 aa18.23■□□□□ 0.51
PFN1-201ENST00000225655 DSPP15924 2871 aaKnown RBP18.23■□□□□ 0.51
PFN1-201ENST00000225655 A0A0U1RQJ8 604 aa18.22■□□□□ 0.51
PFN1-201ENST00000225655 C16orf96A6NNT2 1141 aa18.22■□□□□ 0.51
PFN1-201ENST00000225655 KRIT1O00522 736 aa18.22■□□□□ 0.51
PFN1-201ENST00000225655 TRIM38O00635 465 aa18.22■□□□□ 0.51
PFN1-201ENST00000225655 TSPAN6O43657 245 aa18.22■□□□□ 0.51
PFN1-201ENST00000225655 POP4O95707 220 aaKnown RBP18.22■□□□□ 0.51
PFN1-201ENST00000225655 ACP1P24666 158 aa18.22■□□□□ 0.51
PFN1-201ENST00000225655 CTNNA1P35221 906 aaKnown RBP18.22■□□□□ 0.51
PFN1-201ENST00000225655 CYP4F3Q08477 520 aa18.22■□□□□ 0.51
PFN1-201ENST00000225655 MYLK3Q32MK0 819 aa18.22■□□□□ 0.51
PFN1-201ENST00000225655 TXNRD3NBQ6F5E7 133 aa18.22■□□□□ 0.51
PFN1-201ENST00000225655 Q6ZSR6 202 aa18.22■□□□□ 0.51
PFN1-201ENST00000225655 KATNAL2Q8IYT4 538 aa18.22■□□□□ 0.51
PFN1-201ENST00000225655 SLC22A18ASQ8N1D0 253 aa18.22■□□□□ 0.51
PFN1-201ENST00000225655 OR4C6Q8NH72 309 aa18.22■□□□□ 0.51
PFN1-201ENST00000225655 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.22■□□□□ 0.51
PFN1-201ENST00000225655 CASKIN2Q8WXE0 1202 aa18.22■□□□□ 0.51
PFN1-201ENST00000225655 C1QTNF2Q9BXJ5 285 aa18.22■□□□□ 0.51
PFN1-201ENST00000225655 OSBPL1AQ9BXW6 950 aa18.22■□□□□ 0.51
PFN1-201ENST00000225655 GOLPH3Q9H4A6 298 aa18.22■□□□□ 0.51
PFN1-201ENST00000225655 TRMT1Q9NXH9 659 aaKnown RBP18.22■□□□□ 0.51
PFN1-201ENST00000225655 CAPN6Q9Y6Q1 641 aa18.22■□□□□ 0.51
PFN1-201ENST00000225655 ADAMTS20P59510 1910 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 TDRD6O60522 2096 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms