RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Gm5751A2AHC8 147 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Mtx3D3YTP3 312 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Hmgxb3G3X9M3 1254 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Usp46P62069 366 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 1700061G19RikQ08EE8 705 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Coq10bQ3THF9 240 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Kcna4Q61423 654 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 RadilQ69Z89 1099 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Podnl1Q6P3Y9 559 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Gm7247Q6UY52 187 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Clec18aQ7TSQ1 534 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Catsper3Q80W99 395 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Mppe1Q80XL7 396 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Atp2c1Q80XR2 918 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Rnft1Q9DCN7 395 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 RpgrQ9R0X5 1001 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Wdr46Q9Z0H1 622 aaKnown RBP16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Gm28168A0A087WNP1 180 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Gm13212B1ASQ7 799 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Gm5160F8VPN3 147 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Vmn1r76F8VQ63 324 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Kpna6O35345 536 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Rpl5P47962 297 aaKnown RBP16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Gpc4P51655 557 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Gp1bbP56400 206 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 YwhaqP68254 245 aaKnown RBP16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Kir3dl1P83555 432 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Hbq1bQ3U0A6 142 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Serpina3gQ5I2A0 440 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Lcp1Q61233 627 aaKnown RBP16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Cspg5Q71M36 566 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 RtknQ8C6B2 564 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Hmgcll1Q8JZS7 343 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Ssx2ipQ8VC66 615 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Slc13a3Q91Y63 600 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Tcaf2Q921K8 919 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Echdc3Q9D7J9 300 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 MecrQ9DCS3 373 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Tagln3Q9R1Q8 199 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Cldn3Q9Z0G9 219 aa16.14■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Gm12248A0A1W2P8B8 313 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Ssxb8B1AY40 170 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Trim30bE9PVL6 203 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Olfr596F8VQ26 312 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Ctps2P70303 586 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 TdrkhQ80VL1 560 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Tmcc2Q80W04 706 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 CntrobQ8CB62 887 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Gbp5Q8CFB4 590 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Otud7aQ8R554 926 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Serpina3nQ91WP6 418 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 DeraQ91YP3 318 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 DdoQ922Z0 341 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Adam33Q923W9 797 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Ndufaf7Q9CWG8 436 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Nt5cQ9JM14 200 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Kcnt2D3Z649 1135 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Rnf19aP50636 840 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Dpf3P58269 378 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Rslcan18Q7M6X5 460 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 PolnQ7TQ07 864 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Nim1kQ8BHI9 436 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Msantd1Q8BIL2 278 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Ldhal6bQ8BVP2 382 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Cox18Q8VC74 331 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Ggt7Q99JP7 662 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Cyp4f14Q9EP75 524 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Cngb3Q9JJZ9 694 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Syt5Q9R0N5 386 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Bscl2Q9Z2E9 383 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Gm21964A0A1W2P7S4 437 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Map7d3A2AEY4 876 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Gm14401A2ARV7 303 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Ankrd16A2AS55 361 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Grik3B1AS29 919 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Ccnd1P25322 295 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Tial1P70318 392 aaKnown RBP16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Fam91a1Q3UVG3 837 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Gm5431Q5NCB3 844 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Dusp11Q6NXK5 321 aaKnown RBP16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Slco2b1Q8BXB6 683 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Sdcbp2Q99JZ0 292 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Gmpr2Q99L27 348 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Lysmd3Q99LE3 305 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 CenpsQ9D084 142 aa16.13■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Dnah12Q3V0Q1 3086 aa16.12■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Dock1Q8BUR4 1865 aa16.12■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Gm6509A0A0J9YUV1 481 aa16.12■□□□□ 0.17
Ckap4-201ENSMUST00000053871 NuggcD3YWJ0 796 aa16.12■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Gm6351K9J7D1 481 aa16.12■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Tgm2P21981 686 aaKnown RBP16.12■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Treml2Q2LA85 329 aa16.12■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Kansl1lQ5DTI6 991 aa16.12■□□□□ 0.17
Ckap4-201ENSMUST00000053871 RbfaQ6P3B9 350 aa16.12■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Olfr698Q7TRN4 311 aa16.12■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Pex19Q8VCI5 299 aa16.12■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Ppp6cQ9CQR6 305 aa16.12■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Poc5Q9DBS8 558 aa16.12■□□□□ 0.17
Ckap4-201ENSMUST00000053871 H2afyQ9QZQ8 372 aaKnown RBP16.12■□□□□ 0.17
Ckap4-201ENSMUST00000053871 Fiz1Q9WTJ4 500 aa16.12■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms