RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Hnrnph3D3Z3N4 346 aaKnown RBP6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Fbxl18E9PYR1 771 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm6205E9PZS2 359 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cxcr3O88410 367 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ly6aP05533 134 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Akt1P31750 480 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm29609Q3UU56 907 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Q3UY34 256 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cfhr2Q4LDF6 332 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Grhl3Q5FWH3 603 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gcnt3Q5JCT0 437 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Baiap2l2Q80Y61 522 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Zfp438Q8BFX2 798 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Il17reQ8BH06 637 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gtf3c2Q8BL74 907 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Nat14Q8BVG8 206 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm6367Q8C6L9 287 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Acat2Q8CAY6 397 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Setd7Q8VHL1 366 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Usp3Q91W36 520 aaKnown RBP6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Slc24a3Q99PD7 645 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cmtm8Q9CZR4 173 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Mrps33Q9D2R8 106 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Mfap5Q9QZJ6 164 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Asb3Q9WV72 525 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ly6g6dQ9Z1Q3 135 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Vmn1r88E9Q235 316 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Scgb2b19J3QM75 112 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Lefty2P57785 368 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Snrpd1P62315 119 aaKnown RBP6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Q14AM7 275 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Mcm9Q2KHI9 1134 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Tubal3Q3UX10 446 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ppp2r5eQ61151 467 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm7247Q6UY52 187 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Hfe2Q7TQ32 420 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ankrd49Q8VE42 238 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Olfr722Q8VFC8 308 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ndufs1Q91VD9 727 aaKnown RBP6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Edem1Q925U4 652 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Fam83dQ9D7I8 585 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Stx12Q9ER00 274 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ecel1Q9JMI0 775 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Vmn1r49Q9WUF1 310 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Adam17Q9Z0F8 827 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Serpinb6cW4VSP4 379 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm31371A0A1D5RM70 265 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 DgkdE9PUQ8 1220 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pcsk6F6XJP7 959 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 AF366264G3X9P9 502 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Snx12O70493 165 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Nr3c1P06537 783 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Casp2P29594 452 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Nkx2-5P42582 318 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gucy2eP52785 1108 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Znf367Q0VDT2 340 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ccdc127Q3TC33 260 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pyroxd1Q3TMV7 498 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ubtfl1Q3USZ2 394 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Arhgef9Q3UTH8 516 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Kdm7aQ3UWM4 940 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Tmem255bQ5FW56 369 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Nfe2l1Q61985 741 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Tfdp2Q64163 446 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ankrd6Q69ZU8 712 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Rxfp4Q7TQP4 414 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ano4Q8C5H1 955 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Acad10Q8K370 1069 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Brd8Q8R3B7 951 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Eif3hQ91WK2 352 aaKnown RBP6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Stk33Q924X7 491 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Snx7Q9CY18 387 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Mau2Q9D2X5 619 aaKnown RBP6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cib4Q9D9N5 185 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm5538W4VSP6 401 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Sypl1O09117 261 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Tubgcp3P58854 905 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 OtulinQ3UCV8 352 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm4981Q3ULJ8 291 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ermp1Q3UVK0 898 aaKnown RBP6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm14685Q52KH6 695 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Atp4aQ64436 1033 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Stx3Q64704 289 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ephx4Q6IE26 359 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Phf8Q80TJ7 1023 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 H2-M10.2Q85ZW9 329 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Vipas39Q8BGQ1 491 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Exoc3l1Q8BI71 739 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Enpp4Q8BTJ4 456 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Psapl1Q8C1C1 522 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cabs1Q8C633 391 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Fnbp1lQ8K012 605 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 LipmQ8K2A6 422 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Smap1Q91VZ6 440 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Msantd4Q91YU3 345 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gprc5bQ923Z0 410 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Psip1Q99JF8 528 aaKnown RBP6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gimap4Q99JY3 219 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cdk5rap3Q99LM2 503 aa6.95□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Col25a1Q99MQ5 666 aa6.95□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms