RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 PPP1R8Q12972 351 aaKnown RBP15.31■□□□□ 0.04
PMS1-221ENST00000624204 INPP5AQ14642 412 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 ZNF347Q96SE7 839 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 UHRF1Q96T88 793 aaPredicted RBP15.31■□□□□ 0.04
PMS1-221ENST00000624204 LPIN3Q9BQK8 851 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 MROQ9BYG7 248 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 JPH1Q9HDC5 661 aaPredicted RBP15.31■□□□□ 0.04
PMS1-221ENST00000624204 PXMP2Q9NR77 195 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 TMPRSS4Q9NRS4 437 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 TRAF6Q9Y4K3 522 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 SNX9Q9Y5X1 595 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 TRPC5OSA6NMA1 111 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 NRP2O60462 931 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 SYNCRIPO60506 623 aaKnown RBP15.31■□□□□ 0.04
PMS1-221ENST00000624204 CABYRO75952 493 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 IL18RAPO95256 599 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 ARL1P40616 181 aaPredicted RBP15.31■□□□□ 0.04
PMS1-221ENST00000624204 CBLBQ13191 982 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 PPIL2Q13356 520 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 ZNF846Q147U1 533 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 GRM3Q14832 879 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 CMTR2Q8IYT2 770 aaKnown RBP15.31■□□□□ 0.04
PMS1-221ENST00000624204 PYROXD2Q8N2H3 581 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 LRRC71Q8N4P6 559 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 KDM1BQ8NB78 822 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 TMEM176AQ96HP8 235 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 QKIQ96PU8 341 aaKnown RBP eCLIP15.31■□□□□ 0.047e-8■■■■□ 22.9
PMS1-221ENST00000624204 ADAM28Q9UKQ2 775 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 B3GNT3Q9Y2A9 372 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 CCDC162PA2VCL2 907 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 INPP4BO15327 924 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 DLX3O60479 287 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 OXTRP30559 389 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 CAPGP40121 348 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 SPANXN3Q5MJ09 141 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 SULF1Q8IWU6 871 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 OR13F1Q8NGS4 319 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 HDAC10Q969S8 669 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 SH3YL1Q96HL8 342 aaPredicted RBP15.31■□□□□ 0.04
PMS1-221ENST00000624204 TDRD1Q9BXT4 1180 aaKnown RBP15.31■□□□□ 0.04
PMS1-221ENST00000624204 LHPPQ9H008 270 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 NOL6Q9H6R4 1146 aaKnown RBP15.31■□□□□ 0.04
PMS1-221ENST00000624204 SMPD3Q9NY59 655 aaPredicted RBP15.31■□□□□ 0.04
PMS1-221ENST00000624204 GIMAP2Q9UG22 337 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 MICAL3Q7RTP6 2002 aa15.31■□□□□ 0.04
PMS1-221ENST00000624204 PRKAA2P54646 552 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 TMBIM6P55061 237 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 CAPRIN1Q14444 709 aaKnown RBP15.3■□□□□ 0.04
PMS1-221ENST00000624204 XKR3Q5GH77 459 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 KRT27Q7Z3Y8 459 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 KIAA2013Q8IYS2 634 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 RAB2BQ8WUD1 216 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 LRCH3Q96II8 777 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 PORCNQ9H237 461 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 LRRC40Q9H9A6 602 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 ERVK-11Q9UQG0 969 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 GINS2Q9Y248 185 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 KRT75O95678 551 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 HSPA1AP0DMV8 641 aaKnown RBP15.3■□□□□ 0.04
PMS1-221ENST00000624204 HSPA1BP0DMV9 641 aaKnown RBP15.3■□□□□ 0.04
PMS1-221ENST00000624204 GOT1P17174 413 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 SPCS2Q15005 226 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 VPS72Q15906 364 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 CYP51A1Q16850 503 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 INTS11Q5TA45 600 aaKnown RBP15.3■□□□□ 0.04
PMS1-221ENST00000624204 CLEC14AQ86T13 490 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 FAM35AQ86V20 835 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 SIX5Q8N196 739 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 ANKRD52Q8NB46 1076 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 HMGCLL1Q8TB92 370 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 SGCDQ92629 289 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 CSF3RQ99062 836 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 CGREF1Q99674 301 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 PDZD7Q9H5P4 517 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 ITM2CQ9NQX7 267 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 CCM2LQ9NUG4 571 aaPredicted RBP15.3■□□□□ 0.04
PMS1-221ENST00000624204 TBC1D13Q9NVG8 400 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 BFARQ9NZS9 450 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 TIMM44O43615 452 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 NEK2P51955 445 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 BAATQ14032 418 aaPredicted RBP15.3■□□□□ 0.04
PMS1-221ENST00000624204 POLD3Q15054 466 aaPredicted RBP15.3■□□□□ 0.04
PMS1-221ENST00000624204 KIF19Q2TAC6 998 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 IQSEC1Q6DN90 963 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 ZNF280DQ6N043 979 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 CRTC3Q6UUV7 619 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 KCNMB4Q86W47 210 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 TP53INP2Q8IXH6 220 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 ANKRD13AQ8IZ07 590 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 PACRGLQ8N7B6 248 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 P2RY11Q96G91 374 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 CENPNQ96H22 339 aaPredicted RBP15.3■□□□□ 0.04
PMS1-221ENST00000624204 ADAMTS10Q9H324 1103 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 VRTNQ9H8Y1 702 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 CD300AQ9UGN4 299 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 TSPAN16Q9UKR8 245 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 VANGL2Q9ULK5 521 aa15.3■□□□□ 0.04
PMS1-221ENST00000624204 XYLBO75191 536 aa15.29■□□□□ 0.04
PMS1-221ENST00000624204 APOA4P06727 396 aa15.29■□□□□ 0.04
PMS1-221ENST00000624204 NR3C2P08235 984 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms