RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 SERPINI2O75830 405 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 KCNK2O95069 426 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 VAPBO95292 243 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 SEC24AO95486 1093 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 APOA1P02647 267 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 CRHR1P34998 444 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 KRT20P35900 424 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 ALDH7A1P49419 539 aaKnown RBP7.99□□□□□ -1.13
VPS11-209ENST00000622309 CLCNKBP51801 687 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 HK2P52789 917 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 PPP5CP53041 499 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 PRR16Q569H4 304 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 DRICH1Q6PGQ1 229 aaPredicted RBP7.99□□□□□ -1.13
VPS11-209ENST00000622309 USP17L2Q6R6M4 530 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 CYP2R1Q6VVX0 501 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 CDR2LQ86X02 465 aaPredicted RBP7.99□□□□□ -1.13
VPS11-209ENST00000622309 SLC44A2Q8IWA5 706 aaPredicted RBP7.99□□□□□ -1.13
VPS11-209ENST00000622309 ANKRD53Q8N9V6 530 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 MFSD2AQ8NA29 543 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 CPT1BQ92523 772 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 ASB9Q96DX5 294 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 UPF3AQ9H1J1 476 aaKnown RBP7.99□□□□□ -1.13
VPS11-209ENST00000622309 ZNF277Q9NRM2 450 aaPredicted RBP7.99□□□□□ -1.13
VPS11-209ENST00000622309 MOCS1Q9NZB8 636 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 TEKT2Q9UIF3 430 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 DNMT3LQ9UJW3 386 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 CNOT6Q9ULM6 557 aaKnown RBP7.99□□□□□ -1.13
VPS11-209ENST00000622309 AP4E1Q9UPM8 1137 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.99□□□□□ -1.13
VPS11-209ENST00000622309 WBP11Q9Y2W2 641 aaKnown RBP7.99□□□□□ -1.13
VPS11-209ENST00000622309 GAKO14976 1311 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 SYNCRIPO60506 623 aaKnown RBP7.98□□□□□ -1.13
VPS11-209ENST00000622309 PROSCO94903 275 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 SLC34A2O95436 690 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 GRAPQ13588 217 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 KRR1Q13601 381 aaKnown RBP7.98□□□□□ -1.13
VPS11-209ENST00000622309 KIZQ2M2Z5 673 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 WDR44Q5JSH3 913 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 AGAP6Q5VW22 663 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 METTL2BQ6P1Q9 378 aaKnown RBP7.98□□□□□ -1.13
VPS11-209ENST00000622309 CLYBLQ8N0X4 340 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 MFSD4AQ8N468 514 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 ANKFN1Q8N957 763 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 OR7A2PQ8NGA2 310 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 GRAPLQ8TC17 118 aaPredicted RBP7.98□□□□□ -1.13
VPS11-209ENST00000622309 AGAP4Q96P64 663 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 PCDHAC1Q9H158 963 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 ING2Q9H160 280 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 COG4Q9H9E3 785 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 CAPN10Q9HC96 672 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 TCF7L2Q9NQB0 619 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 COQ3Q9NZJ6 369 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 NOCTQ9UK39 431 aaKnown RBP7.98□□□□□ -1.13
VPS11-209ENST00000622309 FARP1Q9Y4F1 1045 aaPredicted RBP7.98□□□□□ -1.13
VPS11-209ENST00000622309 PCDHGB3Q9Y5G1 929 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 CDY2AQ9Y6F7 541 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 CDY1Q9Y6F8 540 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 PSME4Q14997 1843 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 TAF1LQ8IZX4 1826 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 E7ESA3 106 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 RFPL1O75677 317 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 NDST3O95803 873 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 KRT1P04264 644 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 JUNBP17275 347 aaPredicted RBP7.98□□□□□ -1.13
VPS11-209ENST00000622309 PLA2G16P53816 162 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 SLC12A3P55017 1021 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 TAS2R40P59535 323 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 SMARCB1Q12824 385 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 PICALMQ13492 652 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 PLCL1Q15111 1095 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 TYSND1Q2T9J0 566 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 SLC36A3Q495N2 470 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 GPATCH4Q5T3I0 446 aaKnown RBP7.98□□□□□ -1.13
VPS11-209ENST00000622309 MROH9Q5TGP6 573 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 MBLAC2Q68D91 279 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 POTEGQ6S5H5 508 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 ZNF600Q6ZNG1 722 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 GADL1Q6ZQY3 521 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 RCOR2Q8IZ40 523 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 TEX19Q8NA77 164 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 CMASQ8NFW8 434 aaPredicted RBP7.98□□□□□ -1.13
VPS11-209ENST00000622309 MCRS1Q96EZ8 462 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 C19orf43Q9BQ61 176 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 KATNAL1Q9BW62 490 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 FUNDC2Q9BWH2 189 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 DGCR6LQ9BY27 220 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 SERHL2Q9H4I8 314 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 WASH6PQ9NQA3 447 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 PLSCR3Q9NRY6 295 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 ZC3H7BQ9UGR2 993 aaKnown RBP7.98□□□□□ -1.13
VPS11-209ENST00000622309 DUOX1Q9NRD9 1551 aa7.98□□□□□ -1.13
VPS11-209ENST00000622309 FRMPD2Q68DX3 1309 aaPredicted RBP7.98□□□□□ -1.13
VPS11-209ENST00000622309 ZBTB39O15060 712 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 PAPSS1O43252 624 aaPredicted RBP7.97□□□□□ -1.13
VPS11-209ENST00000622309 TGFB1I1O43294 461 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 TBX1O43435 398 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 UPK1BO75841 260 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 HSPA4LO95757 839 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 IL12AP29459 219 aa7.97□□□□□ -1.13
VPS11-209ENST00000622309 POLR2IP36954 125 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms