RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 TFAP2CQ92754 450 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 RRN3Q9NYV6 651 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 PIM2Q9P1W9 311 aa19.76■□□□□ 0.75
PDLIM3-212ENST00000620787 OTOFQ9HC10 1997 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 TRIM64CA6NLI5 447 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 ZNF839A8K0R7 811 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 NRP1O14786 923 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 MRASO14807 208 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 NPR3P17342 541 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 ARNTP27540 789 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 RPL10P27635 214 aaKnown RBP19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 TAS2R39P59534 338 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 PRKCQQ04759 706 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 IRAK1BP1Q5VVH5 260 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 FAM45BPQ6NSW5 357 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 SLC27A1Q6PCB7 646 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 APPL2Q8NEU8 664 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 FAM45AQ8TCE6 357 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 FAR2Q96K12 515 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 EFHD1Q9BUP0 239 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 MRGBPQ9NV56 204 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 ZNHIT2Q9UHR6 403 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 UBQLN1Q9UMX0 589 aaKnown RBP19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 AP3B1O00203 1094 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 RECQL4O94761 1208 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 SNRPB2P08579 225 aaKnown RBP19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 BMP2P12643 396 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 DNAJB2P25686 324 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 ARCN1P48444 511 aaKnown RBP19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 PSMD5Q16401 504 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 EML3Q32P44 896 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 PCID2Q5JVF3 399 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 SAMD4BQ5PRF9 694 aaKnown RBP19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 PAQR9Q6ZVX9 377 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 ZNF554Q86TJ5 538 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 LINC00523Q86TU6 105 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 KLHDC8BQ8IXV7 354 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 SIX6OS1Q8N1H7 587 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 KCTD13Q8WZ19 329 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 ELMO2Q96JJ3 720 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 TNIP3Q96KP6 325 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 PLEKHG4BQ96PX9 1271 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 NXF3Q9H4D5 531 aaKnown RBP19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 GMPR2Q9P2T1 348 aaKnown RBP19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 FBXW11Q9UKB1 542 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 SNX10Q9Y5X0 201 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 TLL2Q9Y6L7 1015 aa19.75■□□□□ 0.75
PDLIM3-212ENST00000620787 SRP72O76094 671 aaKnown RBP19.74■□□□□ 0.75
PDLIM3-212ENST00000620787 KCNA5P22460 613 aa19.74■□□□□ 0.75
PDLIM3-212ENST00000620787 SLC1A2P43004 574 aa19.74■□□□□ 0.75
PDLIM3-212ENST00000620787 CTBSQ01459 385 aa19.74■□□□□ 0.75
PDLIM3-212ENST00000620787 PRPSAP1Q14558 356 aa19.74■□□□□ 0.75
PDLIM3-212ENST00000620787 KCTD21Q4G0X4 260 aa19.74■□□□□ 0.75
PDLIM3-212ENST00000620787 LAYNQ6UX15 382 aa19.74■□□□□ 0.75
PDLIM3-212ENST00000620787 LRRC43Q8N309 656 aa19.74■□□□□ 0.75
PDLIM3-212ENST00000620787 LZTR1Q8N653 840 aa19.74■□□□□ 0.75
PDLIM3-212ENST00000620787 PPWD1Q96BP3 646 aaKnown RBP19.74■□□□□ 0.75
PDLIM3-212ENST00000620787 OSBPL6Q9BZF3 934 aa19.74■□□□□ 0.75
PDLIM3-212ENST00000620787 IGSF5Q9NSI5 407 aa19.74■□□□□ 0.75
PDLIM3-212ENST00000620787 EBF1Q9UH73 591 aa19.74■□□□□ 0.75
PDLIM3-212ENST00000620787 CROTQ9UKG9 612 aa19.74■□□□□ 0.75
PDLIM3-212ENST00000620787 A0A087X1B8 175 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 PPIL2Q13356 520 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 KCTD2Q14681 263 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 POU6F1Q14863 301 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 MARCH8Q5T0T0 291 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 ACBD5Q5T8D3 534 aaPredicted RBP19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 ZNF280DQ6N043 979 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 ESRP1Q6NXG1 681 aaKnown RBP19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 HACD2Q6Y1H2 254 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 CLEC20AQ6ZU45 233 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 RPS27LQ71UM5 84 aaKnown RBP19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 CROCCP3Q8IVE0 287 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 SPNS2Q8IVW8 549 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 SPATA22Q8NHS9 363 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 ISOC1Q96CN7 298 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 ZNF560Q96MR9 790 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 SLC25A23Q9BV35 468 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 CDHR5Q9HBB8 845 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 PLGRKTQ9HBL7 147 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 VPS45Q9NRW7 570 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 TUBA8Q9NY65 449 aaPredicted RBP19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 HACD3Q9P035 362 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 FAF1Q9UNN5 650 aaPredicted RBP19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 DLGAP1O14490 977 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 NRP2O60462 931 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 CAPN15O75808 1086 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 ATP6V1B2P21281 511 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 ENTPD1P49961 510 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 TKTL1P51854 596 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 NUP107P57740 925 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 LAMC2Q13753 1193 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 TECRLQ5HYJ1 363 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 ERMP1Q7Z2K6 904 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 GPR141Q7Z602 305 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 DHFR2Q86XF0 187 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 USP33Q8TEY7 942 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 SNRNP27Q8WVK2 155 aaKnown RBP19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 CANT1Q8WVQ1 401 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms