RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 LENG8Q96PV6 779 aaPredicted RBP13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 CPEB1Q9BZB8 566 aaKnown RBP13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 ISCUQ9H1K1 167 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 MRPL47Q9HD33 250 aaKnown RBP13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 GPR27Q9NS67 375 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 DKK3Q9UBP4 350 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 IPO11Q9UI26 975 aaKnown RBP13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 RALYQ9UKM9 306 aaKnown RBP13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 SPTY2D1-AS1A0A0U1RR47 76 aa13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 A0A1W2PQJ5 194 aa13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 GOLGA6L19H0YKK7 550 aa13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 DFFAO00273 331 aa13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 JUPP14923 745 aa13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 XPAP23025 273 aaPredicted RBP13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 PFN3P60673 137 aa13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 ZNF211Q13398 564 aaPredicted RBP13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 CAMK2BQ13554 666 aa13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 FZD2Q14332 565 aa13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 HS1BP3Q53T59 392 aa13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 TPRG1LQ5T0D9 272 aa13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 AFMIDQ63HM1 303 aa13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 VPS36Q86VN1 386 aa13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 PARGQ86W56 976 aa13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 PSTKQ8IV42 348 aaKnown RBP13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 ARHGAP12Q8IWW6 846 aa13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 NPWQ8N729 165 aa13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 DENND6BQ8NEG7 585 aa13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 OR4C6Q8NH72 309 aa13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 WRAP53Q9BUR4 548 aaKnown RBP13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 SP110Q9HB58 689 aa13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 CWC15Q9P013 229 aaKnown RBP13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 BZW2Q9Y6E2 419 aaKnown RBP13.24□□□□□ -0.29
PRKCSH-218ENST00000593053 COL5A1P20908 1838 aaPredicted RBP13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 CHD6Q8TD26 2715 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 PALMO75781 387 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 TM7SF2O76062 418 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 CSF2P04141 144 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 SERPING1P05155 500 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 GIMD1P0DJR0 217 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 ALPPL2P10696 532 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 TCF4P15884 667 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 IL1R2P27930 398 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 PCK1P35558 622 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 HNF1BP35680 557 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 RGRP47804 291 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 HNRNPKP61978 463 aaKnown RBP eCLIP13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 ZBED6P86452 979 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 DAB2P98082 770 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 CYP4F3Q08477 520 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 ILKQ13418 452 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 SMTNL2Q2TAL5 461 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 CFAP58Q5T655 872 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 HES3Q5TGS1 186 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 ARHGAP36Q6ZRI8 547 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 CAMK1DQ8IU85 385 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 PDCD7Q8N8D1 485 aaKnown RBP13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 TSEN2Q8NCE0 465 aaKnown RBP13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 SYN2Q92777 582 aaPredicted RBP13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 CENPTQ96BT3 561 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 SUV39H2Q9H5I1 410 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 ZWILCHQ9H900 591 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 IFNKQ9P0W0 207 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 KLF15Q9UIH9 416 aa13.23□□□□□ -0.29
PRKCSH-218ENST00000593053 TSPAN11A1L157 253 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 NEMP2A6NFY4 417 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 H3BM21 787 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 H3BRJ5 948 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 SCAMP1O15126 338 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 BUB1BO60566 1050 aaPredicted RBP13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 NEBLO76041 1014 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 MYF5P13349 255 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 NME1P15531 152 aaKnown RBP13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 ACP1P24666 158 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 IGFALSP35858 605 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 HCAR3P49019 387 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 SUOXP51687 545 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 ZNF135P52742 658 aaPredicted RBP13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 ELP6Q0PNE2 266 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 TARDBPQ13148 414 aaKnown RBP eCLIP13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 DPYSQ14117 519 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 GRM3Q14832 879 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 ACAP1Q15027 740 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 UGP2Q16851 508 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 TMEM52BQ4KMG9 183 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 SRLQ86TD4 932 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 TP53INP2Q8IXH6 220 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 ZNF548Q8NEK5 533 aaPredicted RBP13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 HCAR2Q8TDS4 363 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 HSPH1Q92598 858 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 ZNF641Q96N77 438 aaPredicted RBP13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 TUBGCP5Q96RT8 1024 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 CINPQ9BW66 212 aaPredicted RBP13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 C1QTNF7Q9BXJ2 289 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 THAP2Q9H0W7 228 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 PCDH12Q9NPG4 1184 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 MBNL1Q9NR56 388 aaKnown RBP13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 NLGN3Q9NZ94 848 aa13.22□□□□□ -0.29
PRKCSH-218ENST00000593053 CAPN11Q9UMQ6 739 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms