RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 FCRL3Q96P31 734 aaPredicted RBP26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 DHRS4Q9BTZ2 278 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 PPCSQ9HAB8 311 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 LGALS13Q9UHV8 139 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 RPS6KL1Q9Y6S9 549 aa26.3■■□□□ 1.8
SCAMP4-210ENST00000588555 CDH16O75309 829 aa26.29■■□□□ 1.8
SCAMP4-210ENST00000588555 TULP3O75386 442 aa26.29■■□□□ 1.8
SCAMP4-210ENST00000588555 USP1O94782 785 aa26.29■■□□□ 1.8
SCAMP4-210ENST00000588555 PSMC3P17980 439 aa26.29■■□□□ 1.8
SCAMP4-210ENST00000588555 HLA-DPA1P20036 260 aa26.29■■□□□ 1.8
SCAMP4-210ENST00000588555 ECT2LQ008S8 904 aa26.29■■□□□ 1.8
SCAMP4-210ENST00000588555 GRM2Q14416 872 aa26.29■■□□□ 1.8
SCAMP4-210ENST00000588555 POU6F1Q14863 301 aa26.29■■□□□ 1.8
SCAMP4-210ENST00000588555 PCID2Q5JVF3 399 aa26.29■■□□□ 1.8
SCAMP4-210ENST00000588555 DGKKQ5KSL6 1271 aa26.29■■□□□ 1.8
SCAMP4-210ENST00000588555 CES3Q6UWW8 571 aa26.29■■□□□ 1.8
SCAMP4-210ENST00000588555 IFT43Q96FT9 208 aa26.29■■□□□ 1.8
SCAMP4-210ENST00000588555 TM6SF2Q9BZW4 377 aa26.29■■□□□ 1.8
SCAMP4-210ENST00000588555 SMYD2Q9NRG4 433 aa26.29■■□□□ 1.8
SCAMP4-210ENST00000588555 VPS18Q9P253 973 aa26.29■■□□□ 1.8
SCAMP4-210ENST00000588555 SLC24A2Q9UI40 661 aa26.29■■□□□ 1.8
SCAMP4-210ENST00000588555 USP15Q9Y4E8 981 aaPredicted RBP26.29■■□□□ 1.8
SCAMP4-210ENST00000588555 BPTFQ12830 3046 aa26.29■■□□□ 1.8
SCAMP4-210ENST00000588555 ANKRD36A6QL64 1941 aa26.29■■□□□ 1.8
SCAMP4-210ENST00000588555 ZCWPW2A0A1B0GU75 182 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 POC1B-GALNT4F8VUJ3 575 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 PRLP01236 227 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 CSNK1DP48730 415 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 RASA2Q15283 850 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 ANKRD20A4Q4UJ75 823 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 SPANXN3Q5MJ09 141 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 SRLQ86TD4 932 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 UNC5BQ8IZJ1 945 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 ISG20Q96AZ6 181 aaKnown RBP26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 SLC25A13Q9UJS0 675 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 FAM159BA6NKW6 160 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 HMGB1P1B2RPK0 211 aaPredicted RBP26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 RGS16O15492 202 aaPredicted RBP26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 ECI2O75521 394 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 NDST3O95803 873 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 FGF1P05230 155 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 AP1S1P61966 158 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 MESP2Q0VG99 397 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 ARMC3Q5W041 872 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 PTCD2Q8WV60 388 aaKnown RBP26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 TLCD1Q96CP7 247 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 MFSD3Q96ES6 412 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 ZNF778Q96MU6 729 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 PAFAH2Q99487 392 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 GAS2L1Q99501 681 aaPredicted RBP26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 RPP25Q9BUL9 199 aaKnown RBP26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 CD207Q9UJ71 328 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 TCAF1Q9Y4C2 921 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 ARIH1Q9Y4X5 557 aaPredicted RBP26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 PCDHGC4Q9Y5F7 938 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 RAI2Q9Y5P3 530 aa26.28■■□□□ 1.8
SCAMP4-210ENST00000588555 KIAA1549LQ6ZVL6 1849 aa26.27■■□□□ 1.8
SCAMP4-210ENST00000588555 TRAF2Q12933 501 aa26.27■■□□□ 1.8
SCAMP4-210ENST00000588555 FRG1Q14331 258 aaKnown RBP26.27■■□□□ 1.8
SCAMP4-210ENST00000588555 GALNT3Q14435 633 aa26.27■■□□□ 1.8
SCAMP4-210ENST00000588555 C22orf39Q6P5X5 142 aa26.27■■□□□ 1.8
SCAMP4-210ENST00000588555 PKN3Q6P5Z2 889 aa26.27■■□□□ 1.8
SCAMP4-210ENST00000588555 RIBC1Q8N443 379 aaPredicted RBP26.27■■□□□ 1.8
SCAMP4-210ENST00000588555 VOPP1Q96AW1 172 aa26.27■■□□□ 1.8
SCAMP4-210ENST00000588555 ZNF669Q96BR6 464 aaPredicted RBP26.27■■□□□ 1.8
SCAMP4-210ENST00000588555 MRM3Q9HC36 420 aaKnown RBP26.27■■□□□ 1.8
SCAMP4-210ENST00000588555 BCCIPQ9P287 314 aaKnown RBP eCLIP26.27■■□□□ 1.8
SCAMP4-210ENST00000588555 EPS15L1Q9UBC2 864 aa26.27■■□□□ 1.8
SCAMP4-210ENST00000588555 PRKAG3Q9UGI9 489 aa26.27■■□□□ 1.8
SCAMP4-210ENST00000588555 SLCO3A1Q9UIG8 710 aa26.27■■□□□ 1.8
SCAMP4-210ENST00000588555 CHKBQ9Y259 395 aa26.27■■□□□ 1.8
SCAMP4-210ENST00000588555 FAM169AQ9Y6X4 670 aa26.27■■□□□ 1.8
SCAMP4-210ENST00000588555 CXorf49A8MYA2 514 aaPredicted RBP26.26■■□□□ 1.79
SCAMP4-210ENST00000588555 POLR2EP19388 210 aaKnown RBP26.26■■□□□ 1.79
SCAMP4-210ENST00000588555 SLC6A11P48066 632 aa26.26■■□□□ 1.79
SCAMP4-210ENST00000588555 RUNX3Q13761 415 aa26.26■■□□□ 1.79
SCAMP4-210ENST00000588555 CYP4X1Q8N118 509 aa26.26■■□□□ 1.79
SCAMP4-210ENST00000588555 WFIKKN2Q8TEU8 576 aa26.26■■□□□ 1.79
SCAMP4-210ENST00000588555 MYLIPQ8WY64 445 aa26.26■■□□□ 1.79
SCAMP4-210ENST00000588555 MRGPRX3Q96LB0 322 aa26.26■■□□□ 1.79
SCAMP4-210ENST00000588555 RANBP9Q96S59 729 aa26.26■■□□□ 1.79
SCAMP4-210ENST00000588555 CEP44Q9C0F1 390 aa26.26■■□□□ 1.79
SCAMP4-210ENST00000588555 TNKS2Q9H2K2 1166 aa26.26■■□□□ 1.79
SCAMP4-210ENST00000588555 PDHA1P08559 390 aa26.25■■□□□ 1.79
SCAMP4-210ENST00000588555 ADRA1DP25100 572 aa26.25■■□□□ 1.79
SCAMP4-210ENST00000588555 NMBRP28336 390 aa26.25■■□□□ 1.79
SCAMP4-210ENST00000588555 YAF2Q8IY57 180 aa26.25■■□□□ 1.79
SCAMP4-210ENST00000588555 CPA6Q8N4T0 437 aa26.25■■□□□ 1.79
SCAMP4-210ENST00000588555 SERBP1Q8NC51 408 aaKnown RBP eCLIP26.25■■□□□ 1.79
SCAMP4-210ENST00000588555 PPHLN1Q8NEY8 458 aaKnown RBP26.25■■□□□ 1.79
SCAMP4-210ENST00000588555 OR2AP1Q8NGE2 309 aa26.25■■□□□ 1.79
SCAMP4-210ENST00000588555 DCAKDQ8WVC6 231 aa26.25■■□□□ 1.79
SCAMP4-210ENST00000588555 SLC44A1Q8WWI5 657 aa26.25■■□□□ 1.79
SCAMP4-210ENST00000588555 GTSE1Q9NYZ3 720 aa26.25■■□□□ 1.79
SCAMP4-210ENST00000588555 NOVA2Q9UNW9 492 aaKnown RBP26.25■■□□□ 1.79
SCAMP4-210ENST00000588555 ERVW-1Q9UQF0 538 aa26.25■■□□□ 1.79
SCAMP4-210ENST00000588555 H3BQ06 376 aaPredicted RBP26.25■■□□□ 1.79
SCAMP4-210ENST00000588555 FZD6O60353 706 aa26.25■■□□□ 1.79
SCAMP4-210ENST00000588555 IGSF6O95976 241 aa26.25■■□□□ 1.79
SCAMP4-210ENST00000588555 ADGRD1Q6QNK2 874 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms