RNA–Protein interactions for RNA: ENST00000564342.5

NSMCE1-207, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-207ENST00000564342 ATP13A4Q4VNC1 1196 aa8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 SLC45A4Q5BKX6 768 aa8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 PRAMEF14Q5SWL7 426 aa8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 KIAA1161Q6NSJ0 714 aa8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 TMCO3Q6UWJ1 677 aa8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 GAS2L3Q86XJ1 694 aa8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 SPATS2Q86XZ4 545 aaKnown RBP8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 TMEM145Q8NBT3 493 aa8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 TSEN2Q8NCE0 465 aaKnown RBP8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 RAB7BQ96AH8 199 aa8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 SKA1Q96BD8 255 aa8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 ELF4Q99607 663 aaPredicted RBP8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 MYOCQ99972 504 aa8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 CPEB1Q9BZB8 566 aaKnown RBP8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 SP110Q9HB58 689 aa8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 FZD3Q9NPG1 666 aa8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 RCOR3Q9P2K3 495 aaPredicted RBP8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 IPO11Q9UI26 975 aaKnown RBP8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 GGT7Q9UJ14 662 aa8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 PCOLCE2Q9UKZ9 415 aa8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 ITM2BQ9Y287 266 aa8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 CA5BQ9Y2D0 317 aa8.33□□□□□ -1.08
NSMCE1-207ENST00000564342 NCOR2Q9Y618 2525 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 TSPAN11A1L157 253 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 TLR4O00206 839 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 MUSKO15146 869 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 SLC31A1O15431 190 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 FLRT2O43155 660 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 TSPAN6O43657 245 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 PCDHGA12O60330 932 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 DFNA5O60443 496 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 PALMO75781 387 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 MTA2O94776 668 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 PIGNO95427 931 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 PEX11BO96011 259 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 ITIH2P19823 946 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 HNRNPA2B1P22626 353 aaKnown RBP8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 SERPINB6P35237 376 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 GJC1P36383 396 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 SSR1P43307 286 aaKnown RBP8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 CSNK1DP48730 415 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 ZNF75DP51815 510 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 RPS21P63220 83 aaKnown RBP8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 IL9RQ01113 521 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 SLC10A7Q0GE19 358 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 OVGP1Q12889 678 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 HNRNPDQ14103 355 aaKnown RBP8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 DPYSL3Q14195 570 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 KRT81Q14533 505 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 MESDQ14696 234 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 RFTN1Q14699 578 aaPredicted RBP8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 STAT4Q14765 748 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 LRRC73Q5JTD7 316 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 GCNT7Q6ZNI0 430 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 GLRX5Q86SX6 157 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 SRLQ86TD4 932 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 IQCHQ86VS3 1027 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 BAHD1Q8TBE0 780 aaPredicted RBP8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 SLC35G2Q8TBE7 412 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 SETD7Q8WTS6 366 aaKnown RBP8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 MRFAP1L1Q96HT8 127 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 FEM1CQ96JP0 617 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 NSMCE3Q96MG7 304 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 ZNF599Q96NL3 588 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 PSKH2Q96QS6 385 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 CINPQ9BW66 212 aaPredicted RBP8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 MFRPQ9BY79 579 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 SLC17A9Q9BYT1 436 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 SUV39H2Q9H5I1 410 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 ERVMER34-1Q9H9K5 563 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 GDF3Q9NR23 364 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 KLHL11Q9NVR0 708 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 DKK3Q9UBP4 350 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 LCMT1Q9UIC8 334 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 WASF3Q9UPY6 502 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 BTBD3Q9Y2F9 522 aa8.32□□□□□ -1.08
NSMCE1-207ENST00000564342 TMEM110-MUSTN1A8MSY1 372 aa8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 RAD51BO15315 384 aa8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 MFSD11O43934 449 aa8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 BUB1BO60566 1050 aaPredicted RBP8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 MAFKO60675 156 aa8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 MAGEC1O60732 1142 aa8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 LCA5LO95447 670 aa8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 PAK4O96013 591 aaPredicted RBP8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 KRT7P08729 469 aa8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 THEGLP0DJG4 465 aa8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 TIMP2P16035 220 aa8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 CR2P20023 1033 aa8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 EPHA8P29322 1005 aaPredicted RBP8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 AKT2P31751 481 aa8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 RXRGP48443 463 aa8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 CLDN2P57739 230 aa8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 SIM1P81133 766 aaPredicted RBP8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 SHC2P98077 582 aa8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 NSUN2Q08J23 767 aaKnown RBP eCLIP8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 FOXC1Q12948 553 aa8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 LBRQ14739 615 aaKnown RBP8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 GRM3Q14832 879 aa8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 SUZ12Q15022 739 aaKnown RBP8.31□□□□□ -1.08
NSMCE1-207ENST00000564342 PAFAH1B3Q15102 231 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms