RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 PPP6R2O75170 966 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 VPS4BO75351 444 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 CLDN11O75508 207 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 ZMPSTE24O75844 475 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 CNTN5O94779 1100 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 RASGRP1O95267 797 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 CD160O95971 181 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 CALCAP01258 141 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 PDGFAP04085 211 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 MXI1P50539 228 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 BLKP51451 505 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 CCNHP51946 323 aaPredicted RBP7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 RABEP1Q15276 862 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 DEFB109BQ30KR1 87 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 CBWD6Q4V339 395 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 C14orf28Q4W4Y0 310 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 ZCWPW2Q504Y3 356 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 ALFQ53S48 1182 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 CBWD3Q5JTY5 395 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 CBWD5Q5RIA9 395 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 ATP1A1-AS1Q5TC04 95 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 TCTN3Q6NUS6 607 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 LINGO4Q6UY18 593 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 TIPARPQ7Z3E1 657 aaKnown RBP7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 ZNF438Q7Z4V0 828 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 VPS36Q86VN1 386 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 C17orf82Q86X59 251 aaPredicted RBP7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 GKN2Q86XP6 184 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 HID1Q8IV36 788 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 ZNF683Q8IZ20 524 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 BMPERQ8N8U9 685 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 DCAF4L2Q8NA75 395 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 SCG3Q8WXD2 468 aaKnown RBP7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 RAB7BQ96AH8 199 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 FAM149B1Q96BN6 582 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 TCTN2Q96GX1 697 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 RPRD1AQ96P16 312 aaPredicted RBP7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 RBM15Q96T37 977 aaKnown RBP eCLIP7.83□□□□□ -1.162e-10■□□□□ 10
HERPUD1-206ENST00000563343 HEPHQ9BQS7 1158 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 NUDT22Q9BRQ3 303 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 DDA1Q9BW61 102 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 PRDM8Q9NQV8 689 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 LRIT1Q9P2V4 623 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 PILRAQ9UKJ1 303 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 VPS4AQ9UN37 437 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 DOLKQ9UPQ8 538 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 HS3ST4Q9Y661 456 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 KCNMB2Q9Y691 235 aa7.83□□□□□ -1.16
HERPUD1-206ENST00000563343 C16orf96A6NNT2 1141 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 I6L893 689 aaPredicted RBP7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 NUDT21O43809 227 aaKnown RBP7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 ENDOD1O94919 500 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 CPNE6O95741 557 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 LDLRP01130 860 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 PAEPP09466 180 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 KRT13P13646 458 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 CTSEP14091 401 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 BRD2P25440 801 aaKnown RBP7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 GKP32189 559 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 PSMC2P35998 433 aaKnown RBP7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 GPD2P43304 727 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 SERPINH1P50454 418 aaKnown RBP7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 PEX5P50542 639 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 CDH4P55283 916 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 KRT83P78385 493 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 LSM11P83369 360 aaKnown RBP eCLIP7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 ARF5P84085 180 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 NFATC4Q14934 902 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 NR1D2Q14995 579 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 IRF4Q15306 451 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 TAF5Q15542 800 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 MAP9Q49MG5 647 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 CARD16Q5EG05 197 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 HEATR4Q86WZ0 1026 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 FAM114A1Q8IWE2 563 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 CCDC13Q8IYE1 715 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 PCDH20Q8N6Y1 951 aaKnown RBP7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 TEX19Q8NA77 164 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 ART4Q93070 314 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 FUBP1Q96AE4 644 aaKnown RBP7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 PDXPQ96GD0 296 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 CCDC74BQ96LY2 380 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 KCNK17Q96T54 332 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 C2orf49Q9BVC5 232 aaPredicted RBP7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 CEP44Q9C0F1 390 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 MUC3BQ9H195 1237 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 ZSCAN16Q9H4T2 348 aaPredicted RBP7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 POPDC2Q9HBU9 364 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 ANLNQ9NQW6 1124 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 ZNF212Q9UDV6 495 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 MAP4K5Q9Y4K4 846 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 ACTL7AQ9Y615 435 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 AKAP9Q99996 3911 aa7.82□□□□□ -1.16
HERPUD1-206ENST00000563343 EFCAB7A8K855 629 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 SART1O43290 800 aaKnown RBP7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 MMP20O60882 483 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 TM7SF2O76062 418 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 RHOCP08134 193 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 FURINP09958 794 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms