RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 NCK2O43639 380 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 ATP6V1G2O95670 118 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 DDX58O95786 925 aaKnown RBP4.54□□□□□ -1.68
ATXN3-227ENST00000554491 HMGN1P05114 100 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 EGR2P11161 476 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-227ENST00000554491 CETPP11597 493 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 EEF2P13639 858 aaKnown RBP4.54□□□□□ -1.68
ATXN3-227ENST00000554491 MYL6BP14649 208 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 VCLP18206 1134 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 POLR2CP19387 275 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-227ENST00000554491 TNFAIP3P21580 790 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 CXCR5P32302 372 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 KRT6CP48668 564 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 ATXN1P54253 815 aaKnown RBP4.54□□□□□ -1.68
ATXN3-227ENST00000554491 MANFP55145 182 aaKnown RBP4.54□□□□□ -1.68
ATXN3-227ENST00000554491 ADARP55265 1226 aaKnown RBP4.54□□□□□ -1.68
ATXN3-227ENST00000554491 EIF4A1P60842 406 aaKnown RBP4.54□□□□□ -1.68
ATXN3-227ENST00000554491 ZBTB16Q05516 673 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 GOLGA8FQ08AF8 430 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 GOLGA8DPQ0D2H9 430 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 RESTQ13127 1097 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 CLUL1Q15846 466 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 BMT2Q1RMZ1 405 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 WSCD2Q2TBF2 565 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 SETMARQ53H47 684 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-227ENST00000554491 MFSD14BQ5SR56 506 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 DENND2CQ68D51 928 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 FAM180BQ6P0A1 224 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 CNNM4Q6P4Q7 775 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 MFSD6Q6ZSS7 791 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 ANO5Q75V66 913 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 KIAA0907Q7Z7F0 614 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-227ENST00000554491 GATAD2AQ86YP4 633 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 CROCCP3Q8IVE0 287 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 MAP7D3Q8IWC1 876 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 C12orf56Q8IXR9 622 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 SLC44A3Q8N4M1 653 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 ANKRD44Q8N8A2 993 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 ZNF565Q8N9K5 539 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 PCSK9Q8NBP7 692 aaKnown RBP4.54□□□□□ -1.68
ATXN3-227ENST00000554491 FAM98AQ8NCA5 519 aaKnown RBP4.54□□□□□ -1.68
ATXN3-227ENST00000554491 ZNF540Q8NDQ6 660 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 DDHD1Q8NEL9 900 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 PJA1Q8NG27 643 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 SLC35B2Q8TB61 432 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 ATP8B4Q8TF62 1192 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 HSPH1Q92598 858 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 METTL2AQ96IZ6 378 aaKnown RBP4.54□□□□□ -1.68
ATXN3-227ENST00000554491 HS6ST2Q96MM7 605 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 TTC25Q96NG3 672 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 CDRT15Q96T59 188 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 DHRS9Q9BPW9 319 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 CCDC106Q9BWC9 280 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 MRPL1Q9BYD6 325 aaKnown RBP4.54□□□□□ -1.68
ATXN3-227ENST00000554491 MROH8Q9H579 483 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 DENND2DQ9H6A0 471 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-227ENST00000554491 NEK6Q9HC98 313 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 TRPC7Q9HCX4 862 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 VTA1Q9NP79 307 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 WASH6PQ9NQA3 447 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 DDX18Q9NVP1 670 aaKnown RBP4.54□□□□□ -1.68
ATXN3-227ENST00000554491 TAS2R7Q9NYW3 318 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.54□□□□□ -1.68
ATXN3-227ENST00000554491 LARSQ9P2J5 1176 aaKnown RBP4.54□□□□□ -1.68
ATXN3-227ENST00000554491 SLC7A8Q9UHI5 535 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 AMACRQ9UHK6 382 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 TRMT112Q9UI30 125 aaKnown RBP4.54□□□□□ -1.68
ATXN3-227ENST00000554491 RAB21Q9UL25 225 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 GABRQQ9UN88 632 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 MAPRE3Q9UPY8 281 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 TNNQ9UQP3 1299 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 LRRC42Q9Y546 428 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 FPGT-TNNI3KV9GXZ4 949 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 ZNF318Q5VUA4 2279 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 PLXNA1Q9UIW2 1896 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 ITIH6Q6UXX5 1313 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 CFAP73A6NFT4 308 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 BECN2A8MW95 431 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 PSMD9O00233 223 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 SLC7A4O43246 635 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 ADCY6O43306 1168 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 PEX1O43933 1283 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 CRYZL1O95825 349 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 GUCA1CO95843 209 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 ZBED1O96006 694 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 CD4P01730 458 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 ABCB1P08183 1280 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-227ENST00000554491 ITGA2BP08514 1039 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 IFIT2P09913 472 aaKnown RBP4.53□□□□□ -1.68
ATXN3-227ENST00000554491 CKBP12277 381 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 ALADP13716 330 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 ATF6P18850 670 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 CALB2P22676 271 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 ACAT1P24752 427 aaKnown RBP4.53□□□□□ -1.68
ATXN3-227ENST00000554491 IFNA8P32881 189 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 SOX6P35712 828 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 MPLP40238 635 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 ATP5OP48047 213 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 VPS41P49754 854 aa4.53□□□□□ -1.68
ATXN3-227ENST00000554491 FLT3LGP49771 235 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms