RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ITGA5P08648 1049 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 GYS1P13807 737 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 OAS2P29728 719 aaKnown RBP2.46□□□□□ -2.02
SRP54-204ENST00000553923 PPP3CCP48454 512 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 NR1H2P55055 460 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 FOXL2P58012 376 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 ARF3P61204 181 aaPredicted RBP2.46□□□□□ -2.02
SRP54-204ENST00000553923 ARF1P84077 181 aaKnown RBP2.46□□□□□ -2.02
SRP54-204ENST00000553923 RHAGQ02094 409 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 ZBTB16Q05516 673 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 CUL4BQ13620 913 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 PSMD6Q15008 389 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 RAB30Q15771 203 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 C14orf177Q52M58 125 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 FAM205BPQ63HN1 556 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 LIN54Q6MZP7 749 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 C9orf139Q6ZV77 190 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 MARK2Q7KZI7 788 aaKnown RBP2.46□□□□□ -2.02
SRP54-204ENST00000553923 RRAGAQ7L523 313 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 GATAD2AQ86YP4 633 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 CPOQ8IVL8 374 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 TEX11Q8IYF3 940 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 FAM185AQ8N0U4 392 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 OR4N4Q8N0Y3 316 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 NAGSQ8N159 534 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 LSMEM1Q8N8F7 131 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 LMNTD1Q8N9Z9 388 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 GLIS1Q8NBF1 620 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 POC1AQ8NBT0 407 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 ZNF114Q8NC26 417 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 CEP70Q8NHQ1 597 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 FAM71BQ8TC56 605 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 CSGALNACT1Q8TDX6 532 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 SLC22A17Q8WUG5 538 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 GOLGA1Q92805 767 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 RSRC1Q96IZ7 334 aaKnown RBP2.46□□□□□ -2.02
SRP54-204ENST00000553923 ZMAT2Q96NC0 199 aaKnown RBP2.46□□□□□ -2.02
SRP54-204ENST00000553923 SERINC2Q96SA4 455 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 SLC25A33Q9BSK2 321 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 JMJD4Q9H9V9 463 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 PREBQ9HCU5 417 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 NKIRAS2Q9NYR9 191 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 NFKBIL1Q9UBC1 381 aaPredicted RBP2.46□□□□□ -2.02
SRP54-204ENST00000553923 VPS28Q9UK41 221 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 FEM1BQ9UK73 627 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 AGO1Q9UL18 857 aaKnown RBP2.46□□□□□ -2.02
SRP54-204ENST00000553923 CYP3A7-CYP3A51PA0A087WV96 503 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 IGHV4-28A0A0C4DH34 117 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 A0A1B0GU03 582 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 PGPEP1LA6NFU8 196 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 NKX2-8O15522 239 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 HOXC11O43248 304 aaPredicted RBP2.45□□□□□ -2.02
SRP54-204ENST00000553923 PLOD3O60568 738 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 ZG16O60844 167 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 TAF5LO75529 589 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 DDX58O95786 925 aaKnown RBP2.45□□□□□ -2.02
SRP54-204ENST00000553923 APOHP02749 345 aaPredicted RBP2.45□□□□□ -2.02
SRP54-204ENST00000553923 ALDOAP04075 364 aaKnown RBP2.45□□□□□ -2.02
SRP54-204ENST00000553923 APOA4P06727 396 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 HSP90AB1P08238 724 aaKnown RBP2.45□□□□□ -2.02
SRP54-204ENST00000553923 ITGA2BP08514 1039 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 HNRNPA1P09651 372 aaKnown RBP eCLIP2.45□□□□□ -2.02
SRP54-204ENST00000553923 GLULP15104 373 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 NAGAP17050 411 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 CYP3A7P24462 503 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 CHRNA5P30532 468 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 AKT1P31749 480 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 STAT1P42224 750 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 AARSP49588 968 aaKnown RBP eCLIP2.45□□□□□ -2.02
SRP54-204ENST00000553923 PRKAA2P54646 552 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 CASP6P55212 293 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 SNX16P57768 344 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 DCAF7P61962 342 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 UBE3AQ05086 875 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 FOXO1Q12778 655 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 PTK2BQ14289 1009 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 MEA1Q16626 185 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 TSTQ16762 297 aaKnown RBP2.45□□□□□ -2.02
SRP54-204ENST00000553923 AAK1Q2M2I8 961 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 RILPL1Q5EBL4 403 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 ARL6IP4Q66PJ3 421 aaKnown RBP2.45□□□□□ -2.02
SRP54-204ENST00000553923 ANKRD40Q6AI12 368 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 PLEKHA7Q6IQ23 1121 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 FAM47EQ6ZV65 393 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 DGLUCYQ7Z3D6 616 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 CPLX4Q7Z7G2 160 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 ZSCAN30Q86W11 494 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 KLHDC8BQ8IXV7 354 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 CMASQ8NFW8 434 aaPredicted RBP2.45□□□□□ -2.02
SRP54-204ENST00000553923 TDRD7Q8NHU6 1098 aaKnown RBP2.45□□□□□ -2.02
SRP54-204ENST00000553923 KCNG4Q8TDN1 519 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 MCRS1Q96EZ8 462 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 RADILQ96JH8 1075 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 ADGRG7Q96K78 797 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 TTC14Q96N46 770 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 IL17FQ96PD4 163 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 GPR63Q9BZJ6 419 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 PAIP1Q9H074 479 aaKnown RBP2.45□□□□□ -2.02
SRP54-204ENST00000553923 BRD8Q9H0E9 1235 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 LMAN2LQ9H0V9 348 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms