RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ARRDC3Q96B67 414 aa14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 SPATA13Q96N96 652 aa14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 RBM15Q96T37 977 aaKnown RBP eCLIP14.63□□□□□ -0.079e-7■■■■□ 22.2
TNFRSF1A-216ENST00000543995 SLC25A51Q9H1U9 297 aa14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ZSCAN32Q9NX65 697 aa14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 USP36Q9P275 1121 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 DRG1Q9Y295 367 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PCDHGC4Q9Y5F7 938 aa14.63□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ZNF318Q5VUA4 2279 aa14.62□□□□□ -0.07
TNFRSF1A-216ENST00000543995 C5orf60A6NFR6 353 aa14.62□□□□□ -0.07
TNFRSF1A-216ENST00000543995 C16orf96A6NNT2 1141 aa14.62□□□□□ -0.07
TNFRSF1A-216ENST00000543995 SOCS5O75159 536 aa14.62□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CA4P22748 312 aa14.62□□□□□ -0.07
TNFRSF1A-216ENST00000543995 XPAP23025 273 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CD68P34810 354 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1A-216ENST00000543995 DRD3P35462 400 aa14.62□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CNTN1Q12860 1018 aa14.62□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CYP1B1Q16678 543 aa14.62□□□□□ -0.07
TNFRSF1A-216ENST00000543995 P3H1Q32P28 736 aa14.62□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CCDC137Q6PK04 289 aaKnown RBP14.62□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ERN2Q76MJ5 926 aaKnown RBP14.62□□□□□ -0.07
TNFRSF1A-216ENST00000543995 C12orf50Q8NA57 414 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1A-216ENST00000543995 IMP4Q96G21 291 aaKnown RBP14.62□□□□□ -0.07
TNFRSF1A-216ENST00000543995 NSMCE3Q96MG7 304 aa14.62□□□□□ -0.07
TNFRSF1A-216ENST00000543995 GBA3Q9H227 469 aa14.62□□□□□ -0.07
TNFRSF1A-216ENST00000543995 NEUROG2Q9H2A3 272 aa14.62□□□□□ -0.07
TNFRSF1A-216ENST00000543995 RAI2Q9Y5P3 530 aa14.62□□□□□ -0.07
TNFRSF1A-216ENST00000543995 H0Y858 1186 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 GCATO75600 419 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 MMP2P08253 660 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 C7P10643 843 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CD6P30203 668 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 OXTRP30559 389 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 COILP38432 576 aaPredicted RBP14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 P2RY2P41231 377 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 NEK3P51956 506 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 SKOR1P84550 965 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 LMNB2Q03252 620 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 TRAF2Q12933 501 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PRPSAP1Q14558 356 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PCSK7Q16549 785 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 BRAT1Q6PJG6 821 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PARS2Q7L3T8 475 aaKnown RBP14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 FAM160A2Q8N612 972 aaPredicted RBP14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 FRMD1Q8N878 549 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ATL2Q8NHH9 583 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 SPATA22Q8NHS9 363 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 VOPP1Q96AW1 172 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 FCRL5Q96RD9 977 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 HDAC8Q9BY41 377 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 BTBD1Q9H0C5 482 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 UBP1Q9NZI7 540 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 DKK3Q9UBP4 350 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 SERGEFQ9UGK8 458 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 FZD4Q9ULV1 537 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PCDHB9Q9Y5E1 797 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 IGHV1OR15-9A0A0B4J2B8 117 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 FAM47DPA6NHR8 397 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PDE2AO00408 941 aaPredicted RBP14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 TRAFD1O14545 582 aaPredicted RBP14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 MAP3K13O43283 966 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 NDUFS2O75306 463 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PMPCBO75439 489 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 RPP40O75818 363 aaKnown RBP14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ANXA9O76027 345 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 MT-CYBP00156 380 aaPredicted RBP14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ADRB3P13945 408 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PSMB4P28070 264 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 MAP7D1Q3KQU3 841 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ARMC12Q5T9G4 340 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 TTC27Q6P3X3 843 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PRUNE1Q86TP1 453 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 TTC7BQ86TV6 843 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PRPF39Q86UA1 669 aaKnown RBP14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 TAB3Q8N5C8 712 aaPredicted RBP14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 OR14C36Q8NHC7 312 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 HCAR2Q8TDS4 363 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 GRK7Q8WTQ7 553 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 GAB3Q8WWW8 586 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 RTP4Q96DX8 246 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 IFT43Q96FT9 208 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 DDX47Q9H0S4 455 aaKnown RBP14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 SGK2Q9HBY8 427 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 FAM153AQ9UHL3 310 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CDC23Q9UJX2 597 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PCDHGA2Q9Y5H1 932 aa14.61□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PLXND1Q9Y4D7 1925 aa14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 A0A1W2PQ67 120 aa14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ESPNB1AK53 854 aa14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CCDC188H7C350 402 aa14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 SLC7A4O43246 635 aa14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 HTRA2O43464 458 aaPredicted RBP14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PGLSO95336 258 aa14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CPP00450 1065 aa14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 IGLV3-19P01714 112 aa14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ETS1P14921 441 aa14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CNR2P34972 360 aa14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 TNNT3P45378 269 aaPredicted RBP14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 FNTAP49354 379 aa14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 EPHB1P54762 984 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms