RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 AP3M2P53677 418 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 PSME3P61289 254 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 TAP1Q03518 808 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 LAMC2Q13753 1193 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 TRIM71Q2Q1W2 868 aaKnown RBP11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 FAM182AQ5T1J6 154 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 DARS2Q6PI48 645 aaKnown RBP11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 KCNT2Q6UVM3 1135 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 ERMP1Q7Z2K6 904 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 FAM20CQ8IXL6 584 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 GOLM1Q8NBJ4 401 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 SPATA18Q8TC71 538 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 CEP295NLQ96MC4 621 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 NPAS2Q99743 824 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 MUC3BQ9H195 1237 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 TRIT1Q9H3H1 467 aaKnown RBP11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 WDR55Q9H6Y2 383 aaPredicted RBP11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 CPNE5Q9HCH3 593 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 PAK5Q9P286 719 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 ANGPTL3Q9Y5C1 460 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 PCDHGA7Q9Y5G6 932 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 TANC1Q9C0D5 1861 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 TCAF2A6NFQ2 919 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 TEX28O15482 410 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 CA12O43570 354 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 ALX3O95076 343 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 KRT3P12035 628 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 ACO1P21399 889 aaKnown RBP11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 PRKAA2P54646 552 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 SLC25A11Q02978 314 aaKnown RBP11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 BFSP2Q13515 415 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 BRDTQ58F21 947 aaPredicted RBP11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 GTF2IRD2BQ6EKJ0 949 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 ZNF773Q6PK81 442 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 KIAA0408Q6ZU52 694 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 CYS1Q717R9 158 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 PLPPR4Q7Z2D5 763 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 GTF2IRD2Q86UP8 949 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 RFX6Q8HWS3 928 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 LRRC71Q8N4P6 559 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 TP53INP1Q96A56 240 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 FANCEQ9HB96 536 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 NEK6Q9HC98 313 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 PKD2L2Q9NZM6 624 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 TMEM216Q9P0N5 145 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 GJD2Q9UKL4 321 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 AGO2Q9UKV8 859 aaKnown RBP11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 TBX20Q9UMR3 447 aa11.46□□□□□ -0.58
SEMA4D-221ENST00000537934 SAC3D1A6NKF1 404 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 TRIM24O15164 1050 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 ACOX3O15254 700 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 PHGDHO43175 533 aaKnown RBP11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 HOXC11O43248 304 aaPredicted RBP11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 ASNA1O43681 348 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 LGALS2P05162 132 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 POLR2IP36954 125 aaKnown RBP11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 TRIM32Q13049 653 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 SMTNL2Q2TAL5 461 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 DUSP28Q4G0W2 176 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 TAS1R3Q7RTX0 852 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 ARMC8Q8IUR7 673 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 BPIFB6Q8NFQ5 453 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 PPTC7Q8NI37 304 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 STON2Q8WXE9 905 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 ZUFSPQ96AP4 578 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 HHIPL1Q96JK4 782 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 EBNA1BP2Q99848 306 aaKnown RBP11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 CLSTN3Q9BQT9 956 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 NTPCRQ9BSD7 190 aaKnown RBP11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 BEGAINQ9BUH8 593 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 UNC93B1Q9H1C4 597 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 MOCS1Q9NZB8 636 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 HACD3Q9P035 362 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 PCDHA11Q9Y5I1 949 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 MKI67P46013 3256 aaKnown RBP11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 HEATR9A2RTY3 570 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 LRRIQ4A6NIV6 560 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 TBKBP1A7MCY6 615 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 RNF103O00237 685 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 NEMP1O14524 444 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 HDAC3O15379 428 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 DYRK3O43781 588 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 NTRK1P04629 796 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 GJB1P08034 283 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 HOXC6P09630 235 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 PRKCAP17252 672 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 PRKACBP22694 351 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 MAGEA6P43360 314 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 TUFMP49411 452 aaKnown RBP11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 HK2P52789 917 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 PHC1P78364 1004 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 MPP1Q00013 466 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 CAP1Q01518 475 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 CYP24A1Q07973 514 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 WDR44Q5JSH3 913 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 CCNYL2Q5T2Q4 361 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 ZNF280DQ6N043 979 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 CCDC81Q6ZN84 652 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 SLC22A16Q86VW1 577 aa11.45□□□□□ -0.58
SEMA4D-221ENST00000537934 SNX29P2Q8IUI4 249 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms