RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 TSHRP16473 764 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 OR1E1P30953 314 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 SNX16P57768 344 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 ARF5P84085 180 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 SLC6A3Q01959 620 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 C1orf61Q13536 156 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 TGIF1Q15583 401 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 PTPN20Q4JDL3 420 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 ZNF805Q5CZA5 627 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 LCE2AQ5TA79 106 aaPredicted RBP8.32□□□□□ -1.08
USP39-216ENST00000490193 LRRC31Q6UY01 552 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 ZNF574Q6ZN55 896 aaPredicted RBP8.32□□□□□ -1.08
USP39-216ENST00000490193 BNIPLQ7Z465 357 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 TFAP2DQ7Z6R9 452 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 DTX1Q86Y01 620 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 ZDHHC17Q8IUH5 632 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 FSTL5Q8N475 847 aaPredicted RBP8.32□□□□□ -1.08
USP39-216ENST00000490193 C1orf131Q8NDD1 294 aaKnown RBP8.32□□□□□ -1.08
USP39-216ENST00000490193 OR6C4Q8NGE1 309 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 SHC3Q92529 594 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 EXTL1Q92935 676 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 TMEM159Q96B96 161 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 TMEM74Q96NL1 305 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 GFM1Q96RP9 751 aaKnown RBP8.32□□□□□ -1.08
USP39-216ENST00000490193 OSBPL1AQ9BXW6 950 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 SLC13A1Q9BZW2 595 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 TRIM4Q9C037 500 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 B3GNT4Q9C0J1 378 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 STRADBQ9C0K7 418 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 EPB41L5Q9HCM4 733 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 MPP6Q9NZW5 540 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 STAP1Q9ULZ2 295 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 ATP6V1DQ9Y5K8 247 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 TEX15Q9BXT5 2789 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 A0A1W2PQM1 296 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 BICDL2A1A5D9 508 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.31□□□□□ -1.08
USP39-216ENST00000490193 C3orf80F5H4A9 247 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 PPFIA2O75334 1257 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 ENDOD1O94919 500 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 GSRP00390 522 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 ALPIP09923 528 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 TFE3P19532 575 aaPredicted RBP8.31□□□□□ -1.08
USP39-216ENST00000490193 SCNN1AP37088 669 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 SLC19A1P41440 591 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 PEX5P50542 639 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 BLKP51451 505 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 GEMIN4P57678 1058 aaKnown RBP8.31□□□□□ -1.08
USP39-216ENST00000490193 GNA12Q03113 381 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 PPARDQ03181 441 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 ZFP36L1Q07352 338 aaKnown RBP8.31□□□□□ -1.08
USP39-216ENST00000490193 SRSF6Q13247 344 aaKnown RBP8.31□□□□□ -1.08
USP39-216ENST00000490193 ELOCQ15369 112 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 SLC25A52Q3SY17 297 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 FAXCQ5TGI0 409 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 TRIM65Q6PJ69 517 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 TREML4Q6UXN2 200 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 KYQ8NBH2 561 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 TP53I13Q8NBR0 393 aaPredicted RBP8.31□□□□□ -1.08
USP39-216ENST00000490193 SCG3Q8WXD2 468 aaKnown RBP8.31□□□□□ -1.08
USP39-216ENST00000490193 CCDC74AQ96AQ1 378 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 TIGD1Q96MW7 591 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 HAPLN3Q96S86 360 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 ARHGAP9Q9BRR9 750 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 SPON2Q9BUD6 331 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 C1QTNF7Q9BXJ2 289 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 ZYG11BQ9C0D3 744 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 RETREG1Q9H6L5 497 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 ZDHHC6Q9H6R6 413 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 ATP13A1Q9HD20 1204 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.31□□□□□ -1.08
USP39-216ENST00000490193 SEPT10Q9P0V9 454 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 HECAQ9UBI9 543 aaPredicted RBP8.31□□□□□ -1.08
USP39-216ENST00000490193 PPARGC1AQ9UBK2 798 aaKnown RBP8.31□□□□□ -1.08
USP39-216ENST00000490193 GGT7Q9UJ14 662 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 ITM2BQ9Y287 266 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 FCF1Q9Y324 198 aaKnown RBP8.31□□□□□ -1.08
USP39-216ENST00000490193 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.31□□□□□ -1.08
USP39-216ENST00000490193 SNX10Q9Y5X0 201 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 RELNP78509 3460 aa8.31□□□□□ -1.08
USP39-216ENST00000490193 A0A1W2PQC6 194 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 TMEM110-MUSTN1A8MSY1 372 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 NEMP1O14524 444 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 RPLP0P05388 317 aaKnown RBP8.3□□□□□ -1.08
USP39-216ENST00000490193 CELA2BP08218 269 aaPredicted RBP8.3□□□□□ -1.08
USP39-216ENST00000490193 FAM87AP0C7U9 286 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 JMJD7P0C870 316 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 HGFP14210 728 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 PNLIPP16233 465 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 CD82P27701 267 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 CDH5P33151 784 aaPredicted RBP8.3□□□□□ -1.08
USP39-216ENST00000490193 ETFBP38117 255 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 EIF4A3P38919 411 aaKnown RBP8.3□□□□□ -1.08
USP39-216ENST00000490193 GABRB2P47870 512 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 SULT1E1P49888 294 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 DNA2P51530 1060 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 HK3P52790 923 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 CCL7P80098 99 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 NFKB2Q00653 900 aa8.3□□□□□ -1.08
USP39-216ENST00000490193 NRG1Q02297 640 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms