RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 DEFB119Q8N690 84 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 PDCD6IPQ8WUM4 868 aaKnown RBP15.91■□□□□ 0.14
C9orf3-219ENST00000488186 ARRDC3Q96B67 414 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 VAT1Q99536 393 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 IL12RB2Q99665 862 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 NAPGQ99747 312 aaPredicted RBP15.91■□□□□ 0.14
C9orf3-219ENST00000488186 HDAC8Q9BY41 377 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 NOD2Q9HC29 1040 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 CD93Q9NPY3 652 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 MBD1Q9UIS9 605 aaPredicted RBP15.91■□□□□ 0.14
C9orf3-219ENST00000488186 ATP8A1Q9Y2Q0 1164 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 GVINP1Q7Z2Y8 2422 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 ZNF292O60281 2723 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 ABCA7Q8IZY2 2146 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 TCRBV7S2A1N4TA0A589 114 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 PRR23AA6NEV1 266 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 C16orf96A6NNT2 1141 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 RNF103O00237 685 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 NEMP1O14524 444 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 KCNN4O15554 427 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 SEMA4FO95754 770 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 HLA-DQB2P05538 268 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 SERPINF2P08697 491 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 TCP1P17987 556 aaKnown RBP15.9■□□□□ 0.14
C9orf3-219ENST00000488186 BCKDHBP21953 392 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 NFKBIAP25963 317 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 PTPN3P26045 913 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 ACSL1P33121 698 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 DHPSP49366 369 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-219ENST00000488186 LPAL2Q16609 132 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 SYCP2LQ5T4T6 812 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 TMEFF1Q8IYR6 380 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 NDUFAF2Q8N183 169 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 HCAR2Q8TDS4 363 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 C1orf54Q8WWF1 131 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 FOXJ1Q92949 421 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 OSBPL9Q96SU4 736 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 C10orf88Q9H8K7 445 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 HOMER3Q9NSC5 361 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 SERGEFQ9UGK8 458 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 TRHDEQ9UKU6 1024 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 SNX12Q9UMY4 172 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 ZNF148Q9UQR1 794 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 R3HDM2Q9Y2K5 976 aaKnown RBP15.9■□□□□ 0.14
C9orf3-219ENST00000488186 PCDHGC4Q9Y5F7 938 aa15.9■□□□□ 0.14
C9orf3-219ENST00000488186 SDK1Q7Z5N4 2213 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 A0A1W2PQ67 120 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 BCLAF3A2AJT9 711 aaKnown RBP15.89■□□□□ 0.13
C9orf3-219ENST00000488186 MEI4A8MW99 385 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 PCDH8O95206 1070 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 HOXD11P31277 338 aaPredicted RBP15.89■□□□□ 0.13
C9orf3-219ENST00000488186 CASQ1P31415 396 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 DRD3P35462 400 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 TNNT3P45378 269 aaPredicted RBP15.89■□□□□ 0.13
C9orf3-219ENST00000488186 DSC2Q02487 901 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 SNX1Q13596 522 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 PLK5Q496M5 336 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 LAIR1Q6GTX8 287 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 BRAT1Q6PJG6 821 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 PARS2Q7L3T8 475 aaKnown RBP15.89■□□□□ 0.13
C9orf3-219ENST00000488186 RGL4Q8IZJ4 473 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 OR2T34Q8NGX1 318 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 SNX19Q92543 992 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 RAB7BQ96AH8 199 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 TEKT5Q96M29 485 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 WDR24Q96S15 920 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 PHOX2BQ99453 314 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 DUSP15Q9H1R2 295 aaPredicted RBP15.89■□□□□ 0.13
C9orf3-219ENST00000488186 KDM4CQ9H3R0 1056 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 GLOD4Q9HC38 313 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 DKK3Q9UBP4 350 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 ZKSCAN5Q9Y2L8 839 aa15.89■□□□□ 0.13
C9orf3-219ENST00000488186 THADAQ6YHU6 1953 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 CFAP69A5D8W1 941 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 PGRMC1O00264 195 aaKnown RBP15.88■□□□□ 0.13
C9orf3-219ENST00000488186 LRP3O75074 770 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 SOCS5O75159 536 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 GJB3O75712 270 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 FSBPO95073 299 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 ADRB3P13945 408 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 CR2P20023 1033 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 ACTN2P35609 894 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 CD86P42081 329 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 EPHB1P54762 984 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 ADPRHP54922 357 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 CCNG2Q16589 344 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 ARMC12Q5T9G4 340 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 AGBL4Q5VU57 503 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 ITPRIPL1Q6GPH6 555 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 ERAP2Q6P179 960 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 ARMCX6Q7L4S7 300 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 ZNF567Q8N184 647 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 CNTD1Q8N815 330 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 CADM4Q8NFZ8 388 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 ATG4AQ8WYN0 398 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 MS4A14Q96JA4 679 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 FEM1CQ96JP0 617 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 SLC25A51Q9H1U9 297 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 RSPH14Q9UHP6 348 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms