RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 NCKAP1Q9Y2A7 1128 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 GPSM3Q9Y4H4 160 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 PCDHGB2Q9Y5G2 931 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 HS3ST4Q9Y661 456 aa9.58□□□□□ -0.88
TMEM39A-208ENST00000486159 EDDM13A0A1B0GTR0 161 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 TRABD2BA6NFA1 517 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 F5H5T6 163 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 K7ERQ8 282 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 NDC80O14777 642 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 VILLO15195 856 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 FLRT2O43155 660 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 BNIP3LO60238 219 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 SNAP91O60641 907 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 RNF8O76064 485 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 APOEP02649 317 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 SRPRAP08240 638 aaKnown RBP9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 GOT1P17174 413 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 PCK1P35558 622 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 CCT8P50990 548 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 RACK1P63244 317 aaKnown RBP9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 SLC7A5Q01650 507 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 CNTN1Q12860 1018 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 NME3Q13232 169 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 ZNF211Q13398 564 aaPredicted RBP9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 ALFQ53S48 1182 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 HSP90B2PQ58FF3 399 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 ODF2Q5BJF6 829 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 TRNP1Q6NT89 227 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 OLFML1Q6UWY5 402 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 USP30Q70CQ3 517 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 BEND5Q7L4P6 421 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 GOLGA6L1Q8N7Z2 621 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 PRELID2Q8N945 189 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 OR2T34Q8NGX1 318 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 MAGOHBQ96A72 148 aaKnown RBP9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 LRRC45Q96CN5 670 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 BTN2A3PQ96KV6 586 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 MCEEQ96PE7 176 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 MYOCQ99972 504 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 ERP44Q9BS26 406 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 MAGEB5Q9BZ81 275 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 SIK2Q9H0K1 926 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 TSPYL1Q9H0U9 437 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 CCDC86Q9H6F5 360 aaKnown RBP9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 ASNSD1Q9NWL6 643 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 OR51B4Q9Y5P0 310 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 ACTL7AQ9Y615 435 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 BPTFQ12830 3046 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 LOC400499M0QZD8 3231 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 IGF2RP11717 2491 aa9.57□□□□□ -0.88
TMEM39A-208ENST00000486159 TBC1D3DA0A087WVF3 549 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 TBC1D3IA0A087WXS9 549 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 TBC1D3EA0A087X179 549 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 TBC1D3KA0A087X1G2 549 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 TYW5A2RUC4 315 aaKnown RBP9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 TBC1D3FA6NER0 549 aaPredicted RBP9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 TBC1D3LB9A6J9 549 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 M0QYT0 321 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 SMAD6O43541 496 aaKnown RBP9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 TNFSF14O43557 240 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 PCDHGA12O60330 932 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 SDC3O75056 442 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 PAGE1O75459 146 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 TJP3O95049 919 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 CTSLP07711 333 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 TBC1D3HP0C7X1 549 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 MYF5P13349 255 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 GLDCP23378 1020 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 PSMA2P25787 234 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 CD38P28907 300 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 COILP38432 576 aaPredicted RBP9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 TNNT3P45378 269 aaPredicted RBP9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 MARCKSL1P49006 195 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 ZNF143P52747 638 aaPredicted RBP9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 C21orf59P57076 290 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 TAS2R38P59533 333 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 RPL7AP62424 266 aaKnown RBP9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 E2F5Q15329 346 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 DLG2Q15700 870 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 CCNG2Q16589 344 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 ACCSLQ4AC99 568 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 RNF219Q5W0B1 726 aaPredicted RBP9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 DUPD1Q68J44 220 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 TBC1D3GQ6DHY5 549 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 TBC1D3CQ6IPX1 549 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 DRICH1Q6PGQ1 229 aaPredicted RBP9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 LINGO4Q6UY18 593 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 Q6ZVU0 165 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 SND1Q7KZF4 910 aaKnown RBP eCLIP9.56□□□□□ -0.882e-7■□□□□ 8.5
TMEM39A-208ENST00000486159 PHLDB2Q86SQ0 1253 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 VSIG1Q86XK7 387 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 ZNF683Q8IZ20 524 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 TBC1D3Q8IZP1 549 aaPredicted RBP9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 EID2Q8N6I1 236 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 ATP6V0D2Q8N8Y2 350 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 TTC13Q8NBP0 860 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 BBOF1Q8ND07 529 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 CCHCR1Q8TD31 782 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 SAP25Q8TEE9 199 aa9.56□□□□□ -0.88
TMEM39A-208ENST00000486159 CASKIN2Q8WXE0 1202 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms