RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 DEPDC4Q8N2C3 294 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 BBS4Q96RK4 519 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 PDCD2LQ9BRP1 358 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 IL22Q9GZX6 179 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 RAB26Q9ULW5 256 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 MAPRE3Q9UPY8 281 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 TDRKHQ9Y2W6 561 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 CXCL11O14625 94 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 RAMP2O60895 175 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 VCLP18206 1134 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 TGM3Q08188 693 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 ILF2Q12905 390 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 ITGA7Q13683 1181 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 PGM5Q15124 567 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 ATP13A4Q4VNC1 1196 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 PAGE2BQ5JRK9 111 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 PCID2Q5JVF3 399 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 FBXO47Q5MNV8 452 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 USP50Q70EL3 339 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 KCNK18Q7Z418 384 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 RNF180Q86T96 592 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 TRABD2AQ86V40 505 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 RNASE11Q8TAA1 199 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 SUN5Q8TC36 379 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 AP3S1Q92572 193 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 CDCA5Q96FF9 252 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 RAPGEFL1Q9UHV5 662 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 SSR3Q9UNL2 185 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 PSMD13Q9UNM6 376 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 A0A0A0MRY4 1105 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 TMEM150BA6NC51 233 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 ANKRD63C9JTQ0 380 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 PSIP1O75475 530 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 FARP2O94887 1054 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 SEPHS1P49903 392 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 DRG2P55039 364 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 SPIBQ01892 262 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 RASSF6Q6ZTQ3 369 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 HPS6Q86YV9 775 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 HERC6Q8IVU3 1022 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 LRRN4Q8WUT4 740 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 SPATA13Q96N96 652 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 FDXACB1Q9BRP7 624 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 TRPM5Q9NZQ8 1165 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 SLC12A4Q9UP95 1085 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 FRMPD4Q14CM0 1322 aa9.63□□□□□ -0.87
CDK5RAP2-216ENST00000483412 NTRK1P04629 796 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 LINC00032P0C843 101 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 BMP6P22004 513 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 EIF4BP23588 611 aaKnown RBP9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 OR1E1P30953 314 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 BNIP1Q12981 228 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 USP4Q13107 963 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 CRY2Q49AN0 593 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 ARHGAP15Q53QZ3 475 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 CRTC3Q6UUV7 619 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 GK5Q6ZS86 529 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 SLC9A7Q96T83 725 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 MLPHQ9BV36 600 aaPredicted RBP9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 MORF4L1Q9UBU8 362 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 GNEQ9Y223 722 aaKnown RBP9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 CASTOR2A6NHX0 329 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 H7C4K7 107 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 HDAC3O15379 428 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 TRUB2O95900 331 aaKnown RBP9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 GTF2E2P29084 291 aaKnown RBP9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 SCIMPQ6UWF3 145 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 ECHDC2Q86YB7 292 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 CYP2W1Q8TAV3 490 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 OSGEPL1Q9H4B0 414 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 MAP10Q9P2G4 905 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 CDH22Q9UJ99 828 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 TIMM13Q9Y5L4 95 aaPredicted RBP9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 N6AMT1Q9Y5N5 214 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 PARP4Q9UKK3 1724 aaKnown RBP9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 NRXN3Q9Y4C0 1643 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 NDUFB5O43674 189 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 MTRF1O75570 445 aaKnown RBP9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 ITGA2BP08514 1039 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 PAEPP09466 180 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 OR56A5P0C7T3 313 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 CRY1Q16526 586 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 MAPKAPK3Q16644 382 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 HYIQ5T013 277 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 ADCY4Q8NFM4 1077 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 MRIQ9BWK5 157 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 AVILO75366 819 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 FGFR1P11362 822 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 HGFP14210 728 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 HNRNPLP14866 589 aaKnown RBP eCLIP9.62□□□□□ -0.877e-12■■■■■ 38.3
CDK5RAP2-216ENST00000483412 TBX4P57082 545 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 CYP20A1Q6UW02 462 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 DNERQ8NFT8 737 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 NELL1Q92832 810 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 TMEM159Q96B96 161 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 ERLEC1Q96DZ1 483 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 ACSS3Q9H6R3 686 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 ZFP14Q9HCL3 533 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 TBC1D30Q9Y2I9 924 aa9.62□□□□□ -0.87
CDK5RAP2-216ENST00000483412 EGFRP00533 1210 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms