RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 SEPT3Q9UH03 358 aa12.78□□□□□ -0.36
SKA3-206ENST00000475251 MAN1B1Q9UKM7 699 aa12.78□□□□□ -0.36
SKA3-206ENST00000475251 CTNND2Q9UQB3 1225 aa12.78□□□□□ -0.36
SKA3-206ENST00000475251 KRIT1O00522 736 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 AREL1O15033 823 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 SUV39H1O43463 412 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 PPFIA2O75334 1257 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 RASGRP1O95267 797 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 NTRK1P04629 796 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 RPLP0P05388 317 aaKnown RBP12.77□□□□□ -0.37
SKA3-206ENST00000475251 KRT10P13645 584 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 CD82P27701 267 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 IGFALSP35858 605 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 HK3P52790 923 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 BPIFB4P59827 614 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 PAK1Q13153 545 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 GBP6Q6ZN66 633 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 B3GNT8Q7Z7M8 397 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 TTC7BQ86TV6 843 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 EFCAB3Q8N7B9 438 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 KYQ8NBH2 561 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 TMEM35BQ8NCS4 154 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 MSANTD4Q8NCY6 345 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 PCDH19Q8TAB3 1148 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 CCDC74AQ96AQ1 378 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 TBCBQ99426 244 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 CMKLR1Q99788 373 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 CPEB1Q9BZB8 566 aaKnown RBP12.77□□□□□ -0.37
SKA3-206ENST00000475251 EDEM3Q9BZQ6 932 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 CLPBQ9H078 707 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 PDCL3Q9H2J4 239 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 LRRN3Q9H3W5 708 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 ANLNQ9NQW6 1124 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 SIRPGQ9P1W8 387 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 PISDQ9UG56 409 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 ITM2BQ9Y287 266 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 LOXL2Q9Y4K0 774 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 SNX10Q9Y5X0 201 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 RP1P56715 2156 aa12.77□□□□□ -0.37
SKA3-206ENST00000475251 NAV2Q8IVL1 2488 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 PPP1R3GB7ZBB8 358 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 I6L893 689 aaPredicted RBP12.76□□□□□ -0.37
SKA3-206ENST00000475251 NOBOXO60393 691 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 UGT2B4P06133 528 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 MAPKAPK2P49137 400 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 SUOXP51687 545 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 CCL7P80098 99 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 SRSF1Q07955 248 aaKnown RBP eCLIP12.76□□□□□ -0.371e-8■■■■□ 26.4
SKA3-206ENST00000475251 TGIF1Q15583 401 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 EXOC3L4Q17RC7 722 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 FAM102AQ5T9C2 384 aaPredicted RBP12.76□□□□□ -0.37
SKA3-206ENST00000475251 TMEM164Q5U3C3 297 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 GJB7Q6PEY0 223 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 HID1Q8IV36 788 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 DRC7Q8IY82 874 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 OR6K2Q8NGY2 324 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 ARHGEF2Q92974 986 aaKnown RBP12.76□□□□□ -0.37
SKA3-206ENST00000475251 C18orf8Q96DM3 657 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 KLHL32Q96NJ5 620 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 EPAS1Q99814 870 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 CRACR2AQ9BSW2 395 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 FOXP3Q9BZS1 431 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 AKAP7Q9P0M2 348 aaPredicted RBP12.76□□□□□ -0.37
SKA3-206ENST00000475251 ZNF212Q9UDV6 495 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 GGT7Q9UJ14 662 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 GPR34Q9UPC5 381 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 DOCK4Q8N1I0 1966 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 KIF26BQ2KJY2 2108 aa12.76□□□□□ -0.37
SKA3-206ENST00000475251 A0A1W2PQC6 194 aa12.75□□□□□ -0.37
SKA3-206ENST00000475251 A0A1W2PQM1 296 aa12.75□□□□□ -0.37
SKA3-206ENST00000475251 GTPBP10A4D1E9 387 aaKnown RBP12.75□□□□□ -0.37
SKA3-206ENST00000475251 ZSCAN5CA6NGD5 496 aaPredicted RBP12.75□□□□□ -0.37
SKA3-206ENST00000475251 SPTA1P02549 2419 aa12.75□□□□□ -0.37
SKA3-206ENST00000475251 FAM87AP0C7U9 286 aa12.75□□□□□ -0.37
SKA3-206ENST00000475251 PNLIPP16233 465 aa12.75□□□□□ -0.37
SKA3-206ENST00000475251 ITGB6P18564 788 aa12.75□□□□□ -0.37
SKA3-206ENST00000475251 TFE3P19532 575 aaPredicted RBP12.75□□□□□ -0.37
SKA3-206ENST00000475251 XPAP23025 273 aaPredicted RBP12.75□□□□□ -0.37
SKA3-206ENST00000475251 ELP6Q0PNE2 266 aa12.75□□□□□ -0.37
SKA3-206ENST00000475251 LRRC14Q15048 493 aa12.75□□□□□ -0.37
SKA3-206ENST00000475251 MYLK3Q32MK0 819 aa12.75□□□□□ -0.37
SKA3-206ENST00000475251 COLEC12Q5KU26 742 aa12.75□□□□□ -0.37
SKA3-206ENST00000475251 GDPD4Q6W3E5 623 aa12.75□□□□□ -0.37
SKA3-206ENST00000475251 CCNJLQ8IV13 435 aa12.75□□□□□ -0.37
SKA3-206ENST00000475251 TP53I13Q8NBR0 393 aaPredicted RBP12.75□□□□□ -0.37
SKA3-206ENST00000475251 CASKIN2Q8WXE0 1202 aa12.75□□□□□ -0.37
SKA3-206ENST00000475251 GDAP1L1Q96MZ0 367 aa12.75□□□□□ -0.37
SKA3-206ENST00000475251 B3GNT4Q9C0J1 378 aa12.75□□□□□ -0.37
SKA3-206ENST00000475251 SLC25A18Q9H1K4 315 aa12.75□□□□□ -0.37
SKA3-206ENST00000475251 MAGEH1Q9H213 219 aa12.75□□□□□ -0.37
SKA3-206ENST00000475251 APPL1Q9UKG1 709 aa12.75□□□□□ -0.37
SKA3-206ENST00000475251 PNMA8BQ9ULN7 279 aaPredicted RBP12.75□□□□□ -0.37
SKA3-206ENST00000475251 PCDHGA4Q9Y5G9 962 aa12.75□□□□□ -0.37
SKA3-206ENST00000475251 PIEZO2Q9H5I5 2752 aa12.75□□□□□ -0.37
SKA3-206ENST00000475251 HECTD1Q9ULT8 2610 aa12.75□□□□□ -0.37
SKA3-206ENST00000475251 ZW10O43264 779 aa12.74□□□□□ -0.37
SKA3-206ENST00000475251 MMP20O60882 483 aa12.74□□□□□ -0.37
SKA3-206ENST00000475251 CD160O95971 181 aa12.74□□□□□ -0.37
SKA3-206ENST00000475251 HGFP14210 728 aa12.74□□□□□ -0.37
SKA3-206ENST00000475251 GLB1P16278 677 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms