RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 PGLYRP2Q96PD5 576 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 MRPL57Q9BQC6 102 aaKnown RBP7.37□□□□□ -1.23
USP48-206ENST00000464577 DCUN1D5Q9BTE7 237 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 C9orf16Q9BUW7 83 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 TDRD1Q9BXT4 1180 aaKnown RBP7.37□□□□□ -1.23
USP48-206ENST00000464577 PFDN4Q9NQP4 134 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 ACSS2Q9NR19 701 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 INIPQ9NRY2 104 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 HOXC10Q9NYD6 342 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 ZNF112Q9UJU3 913 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 CDC14AQ9UNH5 594 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 B3GNT3Q9Y2A9 372 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 DERAQ9Y315 318 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 NME7Q9Y5B8 376 aa7.37□□□□□ -1.23
USP48-206ENST00000464577 PLXNA1Q9UIW2 1896 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 FUOMA2VDF0 154 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 EEF2KO00418 725 aaKnown RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 PSMD3O43242 534 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 HBP1O60381 514 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 USP12O75317 370 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 GJB1P08034 283 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 F7P08709 466 aaPredicted RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 OCM2P0CE71 109 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 OCMP0CE72 109 aaPredicted RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 FCGR1AP12314 374 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 LCP1P13796 627 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 NMBRP28336 390 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 LRPAP1P30533 357 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 GLRBP48167 497 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 BCAP31P51572 246 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 CLCN3P51790 818 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 TKTL1P51854 596 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 AIF1P55008 147 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 ATP6V0D1P61421 351 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 PRAMEP78395 509 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 GALNT2Q10471 571 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 GALNT1Q10472 559 aaPredicted RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 BNIP2Q12982 314 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 AARS2Q5JTZ9 985 aaKnown RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 DCAF15Q66K64 600 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 GRAMD4Q6IC98 578 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 NIPAL1Q6NVV3 410 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 EFCAB12Q6NXP0 572 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 CNSTQ6PJW8 725 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 ABRAXAS1Q6UWZ7 409 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 CYP2R1Q6VVX0 501 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 EEPD1Q7L9B9 569 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 EPHX4Q8IUS5 362 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 SLC41A1Q8IVJ1 513 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 CBR4Q8N4T8 237 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 TXNDC5Q8NBS9 432 aaKnown RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 NT5C3BQ969T7 300 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 FEM1CQ96JP0 617 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 ZNF668Q96K58 619 aaPredicted RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 VAT1Q99536 393 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 GPATCH1Q9BRR8 931 aaKnown RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 PAIP1Q9H074 479 aaKnown RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 POMKQ9H5K3 350 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 TMEM165Q9HC07 324 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 EML4Q9HC35 981 aaKnown RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 ANLNQ9NQW6 1124 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 PICK1Q9NRD5 415 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 CHRAC1Q9NRG0 131 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 AGPAT4Q9NRZ5 378 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 GTSE1Q9NYZ3 720 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 ABCD2Q9UBJ2 740 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 MTF2Q9Y483 593 aaPredicted RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 SLC30A1Q9Y6M5 507 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 SOWAHBA6NEL2 793 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 SAC3D1A6NKF1 404 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 KCNK1O00180 336 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 ZBTB24O43167 697 aaPredicted RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 NOL3O60936 208 aaKnown RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 RASAL1O95294 804 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 C22orf31O95567 290 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 ZBTB11O95625 1053 aaPredicted RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 CPNE6O95741 557 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 HSD17B1P14061 328 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 STMN1P16949 149 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 CD68P34810 354 aaPredicted RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 NOS2P35228 1153 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 HCAR3P49019 387 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 SLC7A2P52569 658 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 OXCT1P55809 520 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 TMEM62Q0P6H9 643 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 CDH17Q12864 832 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 PMS2P3Q13401 168 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 RAB39AQ14964 217 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 MAP7D1Q3KQU3 841 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 TBCELQ5QJ74 424 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 CELF3Q5SZQ8 465 aaKnown RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 C1QTNF12Q5T7M4 302 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 NAPEPLDQ6IQ20 393 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 LCN8Q6JVE9 175 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 FASTKD5Q7L8L6 764 aaKnown RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 ANKRD23Q86SG2 305 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 LINC00523Q86TU6 105 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 NIM1KQ8IY84 436 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 ANKRD13AQ8IZ07 590 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 DEFB106AQ8N104 65 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms