RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 SPATA20Q8TB22 786 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 MBOAT7Q96N66 472 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.06□□□□□ -0.96
BRCA1-205ENST00000461221 SAMHD1Q9Y3Z3 626 aaKnown RBP9.06□□□□□ -0.96
BRCA1-205ENST00000461221 CSF1RP07333 972 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 GIMD1P0DJR0 217 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 CLUP10909 449 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 PRKAR2AP13861 404 aaKnown RBP9.06□□□□□ -0.96
BRCA1-205ENST00000461221 CDH3P22223 829 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 PAX7P23759 505 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 GRIK4Q16099 956 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 PTCHD4Q6ZW05 846 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 BEND5Q7L4P6 421 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 SLC4A11Q8NBS3 891 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 ETNPPLQ8TBG4 499 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 OSMRQ99650 979 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 CDADC1Q9BWV3 514 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 EURLQ9NYK6 297 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 OGDHLQ9ULD0 1010 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 EFR3BQ9Y2G0 817 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 ZNF780BQ9Y6R6 833 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 MYO5CQ9NQX4 1742 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 FAM86C2PA6NEL3 165 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 H3BQF6 201 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 UGT2B11O75310 529 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 LRIG2O94898 1065 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 EIF4BP23588 611 aaKnown RBP9.05□□□□□ -0.96
BRCA1-205ENST00000461221 ADRA1DP25100 572 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 NUMBP49757 651 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 CES3Q6UWW8 571 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 FAM131AQ6UXB0 335 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 FAM92BQ6ZTR7 304 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 TXNRD3Q86VQ6 643 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 EIF1ADQ8N9N8 165 aaKnown RBP9.05□□□□□ -0.96
BRCA1-205ENST00000461221 PIH1D2Q8WWB5 315 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 SLC47A1Q96FL8 570 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 TKTL2Q9H0I9 626 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 SMURF2Q9HAU4 748 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 AASDHPPTQ9NRN7 309 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 ARHGAP20Q9P2F6 1191 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 TRPS1Q9UHF7 1281 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 GPN3Q9UHW5 284 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-205ENST00000461221 GRIP1Q9Y3R0 1128 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 AKAP3O75969 853 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 RLN1P04808 185 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 SDC2P34741 201 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 TAS2R41P59536 307 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 BTG3Q14201 252 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-205ENST00000461221 SUZ12Q15022 739 aaKnown RBP9.05□□□□□ -0.96
BRCA1-205ENST00000461221 ZIK1Q3SY52 487 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-205ENST00000461221 SULT1C3Q6IMI6 304 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 GPRIN3Q6ZVF9 776 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 C3orf67Q6ZVT6 689 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 GPR180Q86V85 440 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 RASAL3Q86YV0 1011 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 SLC41A1Q8IVJ1 513 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 PNPLA6Q8IY17 1366 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 ACMSDQ8TDX5 336 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 GMCL1Q96IK5 515 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 RHOBTB2Q9BYZ6 727 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 ASB8Q9H765 288 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 ANKZF1Q9H8Y5 726 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 CLK4Q9HAZ1 481 aaKnown RBP9.05□□□□□ -0.96
BRCA1-205ENST00000461221 MRPS33Q9Y291 106 aaKnown RBP9.05□□□□□ -0.96
BRCA1-205ENST00000461221 NFASCO94856 1347 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 A0A0B4J269 797 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 CASKO14936 926 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 TOP3BO95985 862 aaKnown RBP9.05□□□□□ -0.96
BRCA1-205ENST00000461221 POMCP01189 267 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 HMGCRP04035 888 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 RARAP10276 462 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 ERCC2P18074 760 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 SCRN3Q0VDG4 424 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 BMT2Q1RMZ1 405 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 AP5B1Q2VPB7 878 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 ADAMTSL2Q86TH1 951 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 BORCS5Q969J3 196 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 TRNT1Q96Q11 434 aaKnown RBP9.05□□□□□ -0.96
BRCA1-205ENST00000461221 C3orf14Q9HBI5 128 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 SMPD4Q9NXE4 827 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 PCDHGB3Q9Y5G1 929 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 A0A0A0MRY4 1105 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 SUV39H1O43463 412 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 SCN2BO60939 215 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 ZNF432O94892 652 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 TGFB3P10600 412 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 THRBP10828 461 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 ARF4P18085 180 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-205ENST00000461221 GPD2P43304 727 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 AP3S2P59780 193 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 FAAH2Q6GMR7 532 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 C16orf59Q7L2K0 433 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 JAZF1Q86VZ6 243 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 SIX5Q8N196 739 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 FATE1Q969F0 183 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 B3GALT6Q96L58 329 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 SPATA13Q96N96 652 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 CCDC115Q96NT0 180 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 MRPL57Q9BQC6 102 aaKnown RBP9.05□□□□□ -0.96
BRCA1-205ENST00000461221 PCDH12Q9NPG4 1184 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms