RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 SRLQ86TD4 932 aa17.95■□□□□ 0.46
ATG9A-215ENST00000446716 OR14C36Q8NHC7 312 aa17.95■□□□□ 0.46
ATG9A-215ENST00000446716 CSPG4P5Q96PW8 444 aa17.95■□□□□ 0.46
ATG9A-215ENST00000446716 EBNA1BP2Q99848 306 aaKnown RBP17.95■□□□□ 0.46
ATG9A-215ENST00000446716 ATAD3AQ9NVI7 634 aa17.95■□□□□ 0.46
ATG9A-215ENST00000446716 ATP5F1P24539 256 aaPredicted RBP17.95■□□□□ 0.46
ATG9A-215ENST00000446716 APLP1P51693 650 aa17.95■□□□□ 0.46
ATG9A-215ENST00000446716 RCN1Q15293 331 aa17.95■□□□□ 0.46
ATG9A-215ENST00000446716 SLC26A9Q7LBE3 791 aa17.95■□□□□ 0.46
ATG9A-215ENST00000446716 CTU1Q7Z7A3 348 aaKnown RBP17.95■□□□□ 0.46
ATG9A-215ENST00000446716 ECHDC2Q86YB7 292 aa17.95■□□□□ 0.46
ATG9A-215ENST00000446716 HEXDCQ8WVB3 486 aa17.95■□□□□ 0.46
ATG9A-215ENST00000446716 SEPHS2Q99611 448 aa17.95■□□□□ 0.46
ATG9A-215ENST00000446716 TMEM245Q9H330 911 aa17.95■□□□□ 0.46
ATG9A-215ENST00000446716 PCDHB18PQ96TA0 734 aa17.95■□□□□ 0.46
ATG9A-215ENST00000446716 INSL6Q9Y581 213 aa17.95■□□□□ 0.46
ATG9A-215ENST00000446716 A0A1B0GVM2 712 aa17.95■□□□□ 0.46
ATG9A-215ENST00000446716 TCAF2A6NFQ2 919 aa17.95■□□□□ 0.46
ATG9A-215ENST00000446716 CD3EAPO15446 510 aaKnown RBP17.95■□□□□ 0.46
ATG9A-215ENST00000446716 MAN1A2O60476 641 aa17.95■□□□□ 0.46
ATG9A-215ENST00000446716 FCGR1AP12314 374 aa17.95■□□□□ 0.46
ATG9A-215ENST00000446716 CTBP1Q13363 440 aa17.95■□□□□ 0.46
ATG9A-215ENST00000446716 FAM98BQ52LJ0 330 aaKnown RBP17.95■□□□□ 0.46
ATG9A-215ENST00000446716 ZNF544Q6NX49 715 aa17.95■□□□□ 0.46
ATG9A-215ENST00000446716 PMF1Q6P1K2 205 aa17.95■□□□□ 0.46
ATG9A-215ENST00000446716 PHYKPLQ8IUZ5 450 aa17.95■□□□□ 0.46
ATG9A-215ENST00000446716 H2AFXP16104 143 aaPredicted RBP17.94■□□□□ 0.46
ATG9A-215ENST00000446716 KCNA3P22001 575 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 RPL14P50914 215 aaKnown RBP17.94■□□□□ 0.46
ATG9A-215ENST00000446716 USP39Q53GS9 565 aaKnown RBP17.94■□□□□ 0.46
ATG9A-215ENST00000446716 ZNF786Q8N393 782 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 MRPL48Q96GC5 212 aaKnown RBP17.94■□□□□ 0.46
ATG9A-215ENST00000446716 FZD8Q9H461 694 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 CLIC5Q9NZA1 410 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 RCOR3Q9P2K3 495 aaPredicted RBP17.94■□□□□ 0.46
ATG9A-215ENST00000446716 Q9Y3F1 56 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 TMC5Q6UXY8 1006 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 C2orf15Q8WU43 125 aaKnown RBP17.94■□□□□ 0.46
ATG9A-215ENST00000446716 DPEP3Q9H4B8 488 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 ADPRHL2Q9NX46 363 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 HBS1LQ9Y450 684 aaKnown RBP17.94■□□□□ 0.46
ATG9A-215ENST00000446716 FFAR3O14843 346 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 GPR42O15529 346 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 PAPSS1O43252 624 aaPredicted RBP17.94■□□□□ 0.46
ATG9A-215ENST00000446716 ONECUT3O60422 494 aaPredicted RBP17.94■□□□□ 0.46
ATG9A-215ENST00000446716 ULK1O75385 1050 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 DEAF1O75398 565 aaPredicted RBP17.94■□□□□ 0.46
ATG9A-215ENST00000446716 LBPP18428 481 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 PAGE2Q7Z2X7 111 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 ZNF384Q8TF68 577 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 SIKE1Q9BRV8 207 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 ABCC6O95255 1503 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 FCHO1O14526 889 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 OR10H2O60403 315 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 RGS1Q08116 209 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 TRIM60Q495X7 471 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 XKR6Q5GH73 641 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 TPD52L3Q96J77 140 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 FAM124BQ9H5Z6 455 aaPredicted RBP17.94■□□□□ 0.46
ATG9A-215ENST00000446716 ARHGEF4Q9NR80 690 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 POLR1DQ9Y2S0 133 aa17.94■□□□□ 0.46
ATG9A-215ENST00000446716 FSCN2O14926 492 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 MLYCDO95822 493 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 ALADP13716 330 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 RAB10P61026 200 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 GSTA3Q16772 222 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 CCDC142Q17RM4 750 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 TEX44Q53QW1 395 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 TBCELQ5QJ74 424 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 ZFP28Q8NHY6 868 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 SLC25A23Q9BV35 468 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 TXNRD2Q9NNW7 524 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 EPN2O95208 641 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 HNRNPH3P31942 346 aaKnown RBP17.93■□□□□ 0.46
ATG9A-215ENST00000446716 VHLP40337 213 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 IRX1P78414 480 aaPredicted RBP17.93■□□□□ 0.46
ATG9A-215ENST00000446716 ZDHHC20Q5W0Z9 365 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 ZNF398Q8TD17 642 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 ZNF75CPQ92670 426 aaPredicted RBP17.93■□□□□ 0.46
ATG9A-215ENST00000446716 ERVW-1Q9UQF0 538 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 KLHL20Q9Y2M5 609 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 A0A1W2PQ67 120 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 H0Y858 1186 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 CDK14O94921 469 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 UMPSP11172 480 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 FRG1Q14331 258 aaKnown RBP17.93■□□□□ 0.46
ATG9A-215ENST00000446716 OLFML2BQ68BL8 750 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 PLEKHA7Q6IQ23 1121 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 LINGO4Q6UY18 593 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 RAVER1Q8IY67 606 aaKnown RBP17.93■□□□□ 0.46
ATG9A-215ENST00000446716 CYP4Z2PQ8N1L4 340 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 NPLOC4Q8TAT6 608 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 PROX1Q92786 737 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 C15orf38-AP3S2A0A0A6YYH1 394 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 UQCRBP14927 111 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 ATP6V0D1P61421 351 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 GAD2Q05329 585 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 ARPINQ7Z6K5 226 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 SLC4A11Q8NBS3 891 aa17.93■□□□□ 0.46
ATG9A-215ENST00000446716 PGM2Q96G03 612 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms