RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 SCUBE3Q8IX30 993 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 TBC1D3Q8IZP1 549 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-208ENST00000428599 ZCCHC7Q8N3Z6 543 aaKnown RBP9.01□□□□□ -0.97
CTNND1-208ENST00000428599 ULBP1Q9BZM6 244 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 PORCNQ9H237 461 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 SLC28A3Q9HAS3 691 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 C3orf14Q9HBI5 128 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 BLOC1S4Q9NUP1 217 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 THAP1Q9NVV9 213 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 CLIC5Q9NZA1 410 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 DAPK2Q9UIK4 370 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 CDH9Q9ULB4 789 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 SLC12A4Q9UP95 1085 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 A0A087X0B3 334 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 PSMD10O75832 226 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 LDOC1O95751 146 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-208ENST00000428599 TTPAP49638 278 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 SCNN1GP51170 649 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 KCNMA1Q12791 1236 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 SUZ12Q15022 739 aaKnown RBP9.01□□□□□ -0.97
CTNND1-208ENST00000428599 TEAD4Q15561 434 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 TRMT5Q32P41 509 aaKnown RBP9.01□□□□□ -0.97
CTNND1-208ENST00000428599 LSM12Q3MHD2 195 aaKnown RBP9.01□□□□□ -0.97
CTNND1-208ENST00000428599 SAMD4BQ5PRF9 694 aaKnown RBP9.01□□□□□ -0.97
CTNND1-208ENST00000428599 RAP1GAP2Q684P5 730 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 TMC5Q6UXY8 1006 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 RASAL3Q86YV0 1011 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 ACTRT1Q8TDG2 376 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 C18orf25Q96B23 403 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-208ENST00000428599 VCPIP1Q96JH7 1222 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 GAD1Q99259 594 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 NOD2Q9HC29 1040 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 UBIAD1Q9Y5Z9 338 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 PARP4Q9UKK3 1724 aaKnown RBP9.01□□□□□ -0.97
CTNND1-208ENST00000428599 SLC28A1O00337 649 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 PRKAR2AP13861 404 aaKnown RBP9.01□□□□□ -0.97
CTNND1-208ENST00000428599 ALOX12P18054 663 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 ITPKBP27987 946 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 RPL21P46778 160 aaKnown RBP9.01□□□□□ -0.97
CTNND1-208ENST00000428599 SMCO1Q147U7 214 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 PCID2Q5JVF3 399 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-208ENST00000428599 ILDR1Q86SU0 546 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-208ENST00000428599 PHYKPLQ8IUZ5 450 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 NELL1Q92832 810 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 SEMA4DQ92854 862 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 RHOBTB2Q9BYZ6 727 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.01□□□□□ -0.97
CTNND1-208ENST00000428599 KCNMB3Q9NPA1 279 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 PTGFRNQ9P2B2 879 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 SHPRHQ149N8 1683 aa9.01□□□□□ -0.97
CTNND1-208ENST00000428599 GLUD1P00367 558 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 ELK3P41970 407 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 SEC24CP53992 1094 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 CCL23P55773 120 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 SPIRE1Q08AE8 756 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 GRM3Q14832 879 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 MAP4K3Q8IVH8 894 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 NRSN1Q8IZ57 195 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 ZNF276Q8N554 614 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 MYCBPAPQ8TBZ2 947 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 RASSF1Q9NS23 344 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 PCDHGC5Q9Y5F6 944 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 ZSCAN5CA6NGD5 496 aaPredicted RBP9□□□□□ -0.97
CTNND1-208ENST00000428599 KHDRBS3O75525 346 aaKnown RBP9□□□□□ -0.97
CTNND1-208ENST00000428599 RECQL4O94761 1208 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 PTPN4P29074 926 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 SULT2A1Q06520 285 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 PCBP1Q15365 356 aaKnown RBP eCLIP9□□□□□ -0.974e-9■■■□□ 19
CTNND1-208ENST00000428599 PARP6Q2NL67 630 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 XKR6Q5GH73 641 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 GALNT18Q6P9A2 607 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 CXXC5Q7LFL8 322 aaKnown RBP9□□□□□ -0.97
CTNND1-208ENST00000428599 ATCAYQ86WG3 371 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 IL31RAQ8NI17 732 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 ZNF606Q8WXB4 792 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 MYLPFQ96A32 169 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 APOPT1Q96IL0 206 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 TMEM138Q9NPI0 162 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 CHKBQ9Y259 395 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 TBC1D30Q9Y2I9 924 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 GIT1Q9Y2X7 761 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 IDH3BO43837 385 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 MYL9P24844 172 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 MASP1P48740 699 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 SRP54P61011 504 aaKnown RBP9□□□□□ -0.97
CTNND1-208ENST00000428599 TOP3AQ13472 1001 aaPredicted RBP9□□□□□ -0.97
CTNND1-208ENST00000428599 KLHL12Q53G59 568 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 AKIRIN2Q53H80 203 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 GALNT7Q86SF2 657 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 OAFQ86UD1 273 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 HEXDCQ8WVB3 486 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 C5orf34Q96MH7 638 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 FNDC11Q9BVV2 318 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 DCLRE1BQ9H816 532 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 COG5Q9UP83 839 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 MRPS17Q9Y2R5 130 aaKnown RBP9□□□□□ -0.97
CTNND1-208ENST00000428599 ANKRD63C9JTQ0 380 aa9□□□□□ -0.97
CTNND1-208ENST00000428599 KPNA4O00629 521 aaPredicted RBP9□□□□□ -0.97
CTNND1-208ENST00000428599 SERPINB7O75635 380 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms