RNA–Protein interactions for RNA: ENST00000428088.1

AL954642.1-201, humanhuman

TSL 3 BASIC

Gene AL954642.1, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL954642.1-201ENST00000428088 RABIFP47224 123 aa19.31■□□□□ 0.68
AL954642.1-201ENST00000428088 PAPOLAP51003 745 aaKnown RBP19.31■□□□□ 0.68
AL954642.1-201ENST00000428088 CYP4F3Q08477 520 aa19.31■□□□□ 0.68
AL954642.1-201ENST00000428088 FZD2Q14332 565 aa19.31■□□□□ 0.68
AL954642.1-201ENST00000428088 PPP6R3Q5H9R7 873 aaPredicted RBP19.31■□□□□ 0.68
AL954642.1-201ENST00000428088 FIGNQ5HY92 759 aa19.31■□□□□ 0.68
AL954642.1-201ENST00000428088 CYP4V2Q6ZWL3 525 aaPredicted RBP19.31■□□□□ 0.68
AL954642.1-201ENST00000428088 PDCD7Q8N8D1 485 aaKnown RBP19.31■□□□□ 0.68
AL954642.1-201ENST00000428088 OR4C6Q8NH72 309 aa19.31■□□□□ 0.68
AL954642.1-201ENST00000428088 IFT43Q96FT9 208 aa19.31■□□□□ 0.68
AL954642.1-201ENST00000428088 NCAPGQ9BPX3 1015 aa19.31■□□□□ 0.68
AL954642.1-201ENST00000428088 IPO11Q9UI26 975 aaKnown RBP19.31■□□□□ 0.68
AL954642.1-201ENST00000428088 SCINQ9Y6U3 715 aa19.31■□□□□ 0.68
AL954642.1-201ENST00000428088 FAM208BQ5VWN6 2430 aa19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 SPTY2D1-AS1A0A0U1RR47 76 aa19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 ARHGAP42A6NI28 874 aa19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 EIF3CLB5ME19 914 aaKnown RBP19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 PRAMEF11O60813 436 aa19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 LRCH4O75427 683 aa19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 GIMD1P0DJR0 217 aa19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 ERCC2P18074 760 aa19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 ACP1P24666 158 aa19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 HNF1BP35680 557 aa19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 TPM4P67936 248 aa19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 PDE1CQ14123 709 aaPredicted RBP19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 KLHL40Q2TBA0 621 aa19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 HS1BP3Q53T59 392 aa19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 TPRG1LQ5T0D9 272 aa19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 HES3Q5TGS1 186 aa19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 RFX8Q6ZV50 586 aa19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 VPS36Q86VN1 386 aa19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 CXorf40AQ8TE69 158 aa19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 ASB12Q8WXK4 309 aa19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 EIF3CQ99613 913 aaKnown RBP19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 CPEB1Q9BZB8 566 aaKnown RBP19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 ISCUQ9H1K1 167 aa19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 DKK3Q9UBP4 350 aa19.3■□□□□ 0.68
AL954642.1-201ENST00000428088 URB1O60287 2271 aaKnown RBP19.29■□□□□ 0.68
AL954642.1-201ENST00000428088 NEBLO76041 1014 aa19.29■□□□□ 0.68
AL954642.1-201ENST00000428088 UBASH3AP57075 661 aa19.29■□□□□ 0.68
AL954642.1-201ENST00000428088 HNRNPKP61978 463 aaKnown RBP eCLIP19.29■□□□□ 0.68
AL954642.1-201ENST00000428088 DAB2P98082 770 aa19.29■□□□□ 0.68
AL954642.1-201ENST00000428088 TARDBPQ13148 414 aaKnown RBP eCLIP19.29■□□□□ 0.68
AL954642.1-201ENST00000428088 ILKQ13418 452 aa19.29■□□□□ 0.68
AL954642.1-201ENST00000428088 TDRD12Q587J7 1177 aaKnown RBP19.29■□□□□ 0.68
AL954642.1-201ENST00000428088 HGSNATQ68CP4 663 aa19.29■□□□□ 0.68
AL954642.1-201ENST00000428088 ARHGAP12Q8IWW6 846 aa19.29■□□□□ 0.68
AL954642.1-201ENST00000428088 DENND6BQ8NEG7 585 aa19.29■□□□□ 0.68
AL954642.1-201ENST00000428088 CENPTQ96BT3 561 aa19.29■□□□□ 0.68
AL954642.1-201ENST00000428088 TRIM11Q96F44 468 aa19.29■□□□□ 0.68
AL954642.1-201ENST00000428088 WRAP53Q9BUR4 548 aaKnown RBP19.29■□□□□ 0.68
AL954642.1-201ENST00000428088 SUV39H2Q9H5I1 410 aa19.29■□□□□ 0.68
AL954642.1-201ENST00000428088 MRPL47Q9HD33 250 aaKnown RBP19.29■□□□□ 0.68
AL954642.1-201ENST00000428088 KLF15Q9UIH9 416 aa19.29■□□□□ 0.68
AL954642.1-201ENST00000428088 RAXQ9Y2V3 346 aa19.29■□□□□ 0.68
AL954642.1-201ENST00000428088 ITPR1Q14643 2758 aa19.28■□□□□ 0.68
AL954642.1-201ENST00000428088 ADAMTS20P59510 1910 aa19.28■□□□□ 0.68
AL954642.1-201ENST00000428088 DFFAO00273 331 aa19.28■□□□□ 0.68
AL954642.1-201ENST00000428088 BUB1BO60566 1050 aaPredicted RBP19.28■□□□□ 0.68
AL954642.1-201ENST00000428088 TM7SF2O76062 418 aa19.28■□□□□ 0.68
AL954642.1-201ENST00000428088 CSF2P04141 144 aa19.28■□□□□ 0.68
AL954642.1-201ENST00000428088 MYBL1P10243 752 aa19.28■□□□□ 0.68
AL954642.1-201ENST00000428088 MYF5P13349 255 aa19.28■□□□□ 0.68
AL954642.1-201ENST00000428088 XPAP23025 273 aaPredicted RBP19.28■□□□□ 0.68
AL954642.1-201ENST00000428088 PBX1P40424 430 aa19.28■□□□□ 0.68
AL954642.1-201ENST00000428088 PFN3P60673 137 aa19.28■□□□□ 0.68
AL954642.1-201ENST00000428088 AFMIDQ63HM1 303 aa19.28■□□□□ 0.68
AL954642.1-201ENST00000428088 ARHGAP36Q6ZRI8 547 aa19.28■□□□□ 0.68
AL954642.1-201ENST00000428088 PARGQ86W56 976 aa19.28■□□□□ 0.68
AL954642.1-201ENST00000428088 NPWQ8N729 165 aa19.28■□□□□ 0.68
AL954642.1-201ENST00000428088 CPLX3Q8WVH0 158 aa19.28■□□□□ 0.68
AL954642.1-201ENST00000428088 MBNL1Q9NR56 388 aaKnown RBP19.28■□□□□ 0.68
AL954642.1-201ENST00000428088 CWC15Q9P013 229 aaKnown RBP19.28■□□□□ 0.68
AL954642.1-201ENST00000428088 DKK4Q9UBT3 224 aa19.28■□□□□ 0.68
AL954642.1-201ENST00000428088 COQ6Q9Y2Z9 468 aa19.28■□□□□ 0.68
AL954642.1-201ENST00000428088 ZFYVE26Q68DK2 2539 aa19.28■□□□□ 0.68
AL954642.1-201ENST00000428088 A0A1W2PQJ5 194 aa19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 NEMP2A6NFY4 417 aa19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 SCAMP1O15126 338 aa19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 PALMO75781 387 aa19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 ALPPL2P10696 532 aa19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 NME1P15531 152 aaKnown RBP19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 IL1R2P27930 398 aa19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 IGFALSP35858 605 aa19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 RGRP47804 291 aa19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 EIF2B5Q13144 721 aaKnown RBP19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 SMTNL2Q2TAL5 461 aa19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 TMEM52BQ4KMG9 183 aa19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 C19orf48Q6RUI8 117 aa19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 CAMK1DQ8IU85 385 aa19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 PSTKQ8IV42 348 aaKnown RBP19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 TP53INP2Q8IXH6 220 aa19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 TP53I13Q8NBR0 393 aaPredicted RBP19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 TSEN2Q8NCE0 465 aaKnown RBP19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 ZNF548Q8NEK5 533 aaPredicted RBP19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 HCAR2Q8TDS4 363 aa19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 APOLD1Q96LR9 279 aa19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 SP110Q9HB58 689 aa19.27■□□□□ 0.68
AL954642.1-201ENST00000428088 NLGN3Q9NZ94 848 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms