RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 MMP20O60882 483 aa18.62■□□□□ 0.57
PSPC1-202ENST00000427943 PIAS2O75928 621 aa18.62■□□□□ 0.57
PSPC1-202ENST00000427943 TCF4P15884 667 aa18.62■□□□□ 0.57
PSPC1-202ENST00000427943 SMTNL2Q2TAL5 461 aa18.62■□□□□ 0.57
PSPC1-202ENST00000427943 TPRG1LQ5T0D9 272 aa18.62■□□□□ 0.57
PSPC1-202ENST00000427943 ARHGAP36Q6ZRI8 547 aa18.62■□□□□ 0.57
PSPC1-202ENST00000427943 VPS36Q86VN1 386 aa18.62■□□□□ 0.57
PSPC1-202ENST00000427943 ZSCAN30Q86W11 494 aa18.62■□□□□ 0.57
PSPC1-202ENST00000427943 WRAP53Q9BUR4 548 aaKnown RBP18.62■□□□□ 0.57
PSPC1-202ENST00000427943 THAP2Q9H0W7 228 aa18.62■□□□□ 0.57
PSPC1-202ENST00000427943 CCDC86Q9H6F5 360 aaKnown RBP18.62■□□□□ 0.57
PSPC1-202ENST00000427943 GPR27Q9NS67 375 aa18.62■□□□□ 0.57
PSPC1-202ENST00000427943 DONSONQ9NYP3 566 aa18.62■□□□□ 0.57
PSPC1-202ENST00000427943 CWC15Q9P013 229 aaKnown RBP18.62■□□□□ 0.57
PSPC1-202ENST00000427943 IFNKQ9P0W0 207 aa18.62■□□□□ 0.57
PSPC1-202ENST00000427943 MFHAS1Q9Y4C4 1052 aa18.62■□□□□ 0.57
PSPC1-202ENST00000427943 CHD6Q8TD26 2715 aa18.61■□□□□ 0.57
PSPC1-202ENST00000427943 PKD1L2Q7Z442 2459 aa18.61■□□□□ 0.57
PSPC1-202ENST00000427943 TIMP2P16035 220 aa18.61■□□□□ 0.57
PSPC1-202ENST00000427943 CKMT2P17540 419 aa18.61■□□□□ 0.57
PSPC1-202ENST00000427943 XPAP23025 273 aaPredicted RBP18.61■□□□□ 0.57
PSPC1-202ENST00000427943 IL1R2P27930 398 aa18.61■□□□□ 0.57
PSPC1-202ENST00000427943 IGFALSP35858 605 aa18.61■□□□□ 0.57
PSPC1-202ENST00000427943 RABIFP47224 123 aa18.61■□□□□ 0.57
PSPC1-202ENST00000427943 RGRP47804 291 aa18.61■□□□□ 0.57
PSPC1-202ENST00000427943 ZBED6P86452 979 aa18.61■□□□□ 0.57
PSPC1-202ENST00000427943 PDE1CQ14123 709 aaPredicted RBP18.61■□□□□ 0.57
PSPC1-202ENST00000427943 FZD2Q14332 565 aa18.61■□□□□ 0.57
PSPC1-202ENST00000427943 PROX2Q3B8N5 592 aa18.61■□□□□ 0.57
PSPC1-202ENST00000427943 ZSCAN23Q3MJ62 389 aa18.61■□□□□ 0.57
PSPC1-202ENST00000427943 PROSER1Q86XN7 944 aa18.61■□□□□ 0.57
PSPC1-202ENST00000427943 TP53INP2Q8IXH6 220 aa18.61■□□□□ 0.57
PSPC1-202ENST00000427943 DENND6BQ8NEG7 585 aa18.61■□□□□ 0.57
PSPC1-202ENST00000427943 FAM174AQ8TBP5 190 aa18.61■□□□□ 0.57
PSPC1-202ENST00000427943 CXorf40AQ8TE69 158 aa18.61■□□□□ 0.57
PSPC1-202ENST00000427943 BTBD6Q96KE9 485 aa18.61■□□□□ 0.57
PSPC1-202ENST00000427943 LENG8Q96PV6 779 aaPredicted RBP18.61■□□□□ 0.57
PSPC1-202ENST00000427943 ZWILCHQ9H900 591 aa18.61■□□□□ 0.57
PSPC1-202ENST00000427943 SP110Q9HB58 689 aa18.61■□□□□ 0.57
PSPC1-202ENST00000427943 DKK3Q9UBP4 350 aa18.61■□□□□ 0.57
PSPC1-202ENST00000427943 RALYQ9UKM9 306 aaKnown RBP18.61■□□□□ 0.57
PSPC1-202ENST00000427943 ANKRD11Q6UB99 2663 aaPredicted RBP18.61■□□□□ 0.57
PSPC1-202ENST00000427943 ZFHX4Q86UP3 3567 aa18.6■□□□□ 0.57
PSPC1-202ENST00000427943 SPTY2D1-AS1A0A0U1RR47 76 aa18.6■□□□□ 0.57
PSPC1-202ENST00000427943 GYPCP04921 128 aa18.6■□□□□ 0.57
PSPC1-202ENST00000427943 SERPING1P05155 500 aa18.6■□□□□ 0.57
PSPC1-202ENST00000427943 DAB2P98082 770 aa18.6■□□□□ 0.57
PSPC1-202ENST00000427943 CAMK2BQ13554 666 aa18.6■□□□□ 0.57
PSPC1-202ENST00000427943 DPYSQ14117 519 aa18.6■□□□□ 0.57
PSPC1-202ENST00000427943 AFMIDQ63HM1 303 aa18.6■□□□□ 0.57
PSPC1-202ENST00000427943 PARGQ86W56 976 aa18.6■□□□□ 0.57
PSPC1-202ENST00000427943 DCP2Q8IU60 420 aaKnown RBP18.6■□□□□ 0.57
PSPC1-202ENST00000427943 PSTKQ8IV42 348 aaKnown RBP18.6■□□□□ 0.57
PSPC1-202ENST00000427943 TSEN2Q8NCE0 465 aaKnown RBP18.6■□□□□ 0.57
PSPC1-202ENST00000427943 OR4C6Q8NH72 309 aa18.6■□□□□ 0.57
PSPC1-202ENST00000427943 HSPH1Q92598 858 aa18.6■□□□□ 0.57
PSPC1-202ENST00000427943 SYN2Q92777 582 aaPredicted RBP18.6■□□□□ 0.57
PSPC1-202ENST00000427943 CPEB1Q9BZB8 566 aaKnown RBP18.6■□□□□ 0.57
PSPC1-202ENST00000427943 IPO11Q9UI26 975 aaKnown RBP18.6■□□□□ 0.57
PSPC1-202ENST00000427943 CAPN11Q9UMQ6 739 aa18.6■□□□□ 0.57
PSPC1-202ENST00000427943 COQ6Q9Y2Z9 468 aa18.6■□□□□ 0.57
PSPC1-202ENST00000427943 BZW2Q9Y6E2 419 aaKnown RBP18.6■□□□□ 0.57
PSPC1-202ENST00000427943 ADAMTS20P59510 1910 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 A0A087X0T9 212 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 TRABD2BA6NFA1 517 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 H3BRJ5 948 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 PALMO75781 387 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 NEBLO76041 1014 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 TM7SF2O76062 418 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 PRKCGP05129 697 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 C1SP09871 688 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 FAM228BP0C875 321 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 GIMD1P0DJR0 217 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 PCK1P35558 622 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 PFN3P60673 137 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 SEMG2Q02383 582 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 ZNF211Q13398 564 aaPredicted RBP18.59■□□□□ 0.57
PSPC1-202ENST00000427943 NFKBIBQ15653 356 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 HS1BP3Q53T59 392 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 HES3Q5TGS1 186 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 TXNRD3NBQ6F5E7 133 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 TMPRSS12Q86WS5 348 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 ZSWIM9Q86XI8 627 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 ASB12Q8WXK4 309 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 IFT43Q96FT9 208 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 NUP85Q9BW27 656 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 CINPQ9BW66 212 aaPredicted RBP18.59■□□□□ 0.57
PSPC1-202ENST00000427943 SUV39H2Q9H5I1 410 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.59■□□□□ 0.57
PSPC1-202ENST00000427943 ANAPC7Q9UJX3 599 aa18.59■□□□□ 0.57
PSPC1-202ENST00000427943 ACACAQ13085 2346 aa18.58■□□□□ 0.57
PSPC1-202ENST00000427943 DSPP15924 2871 aaKnown RBP18.58■□□□□ 0.57
PSPC1-202ENST00000427943 TSPAN11A1L157 253 aa18.58■□□□□ 0.56
PSPC1-202ENST00000427943 BUB1BO60566 1050 aaPredicted RBP18.58■□□□□ 0.56
PSPC1-202ENST00000427943 CSF2P04141 144 aa18.58■□□□□ 0.56
PSPC1-202ENST00000427943 MYF5P13349 255 aa18.58■□□□□ 0.56
PSPC1-202ENST00000427943 NME1P15531 152 aaKnown RBP18.58■□□□□ 0.56
PSPC1-202ENST00000427943 AMPD1P23109 780 aa18.58■□□□□ 0.56
PSPC1-202ENST00000427943 ACP1P24666 158 aa18.58■□□□□ 0.56
PSPC1-202ENST00000427943 HNF1BP35680 557 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms