RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 MAPRE1Q15691 268 aaKnown RBP11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 FUT11Q495W5 492 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 TIFABQ6ZNK6 161 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 NT5DC4Q86YG4 428 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 CDAN1Q8IWY9 1227 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 TERB1Q8NA31 727 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 CCNYQ8ND76 341 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 OR52K1Q8NGK4 314 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 SLC7A3Q8WY07 619 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 CERS2Q96G23 380 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 TBC1D14Q9P2M4 693 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 PTGDR2Q9Y5Y4 395 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 USP34Q70CQ2 3546 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 TRIM64A6NGJ6 449 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 PARNO95453 639 aaKnown RBP11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 ITGB6P18564 788 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 LRPAP1P30533 357 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 BMPR1AP36894 532 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 FASTKQ14296 549 aaKnown RBP11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 ATAD3BQ5T9A4 648 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 ANKRD34AQ69YU3 496 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 CRTC3Q6UUV7 619 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 ABRAXAS1Q6UWZ7 409 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 SLCO6A1Q86UG4 719 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 SCUBE3Q8IX30 993 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 DDIASQ8IXT1 998 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 LSMEM2Q8N112 164 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 ATP6V0D2Q8N8Y2 350 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 C12orf29Q8N999 325 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 COLGALT1Q8NBJ5 622 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 OR2T3Q8NH03 318 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 PBXIP1Q96AQ6 731 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 GMCL1Q96IK5 515 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 MROQ9BYG7 248 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 TRIT1Q9H3H1 467 aaKnown RBP11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 ST6GALNAC4Q9H4F1 302 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 ATP13A3Q9H7F0 1226 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 RUVBL2Q9Y230 463 aaKnown RBP11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 PCM1Q15154 2024 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 CLDN25C9JDP6 229 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 GPR25O00155 361 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 INPP4BO15327 924 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 BCAS1O75363 584 aaPredicted RBP11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 TADA2AO75478 443 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 MYF6P23409 242 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 PSMB4P28070 264 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 CASP2P42575 452 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 APLP1P51693 650 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 ZNF132P52740 706 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 C1QTNF8P60827 252 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 NSUN2Q08J23 767 aaKnown RBP eCLIP11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 PDK2Q15119 407 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 SLC36A3Q495N2 470 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 CLEC6AQ6EIG7 209 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 RFPL4BQ6ZWI9 263 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 CAMK1DQ8IU85 385 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 CCDC60Q8IWA6 550 aaPredicted RBP11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 URGCPQ8TCY9 931 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 ING2Q9H160 280 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 SPAG4Q9NPE6 437 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 IPO11Q9UI26 975 aaKnown RBP11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 VPS28Q9UK41 221 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 PTBP2Q9UKA9 531 aaKnown RBP11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 UNCXA6NJT0 531 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 FAM155AB1AL88 458 aaPredicted RBP11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 MRASO14807 208 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 SBK3P0C264 359 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 CLK3P49761 638 aaKnown RBP11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 MCCD1P59942 119 aaPredicted RBP11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 DGCR6Q14129 220 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 TFDP2Q14188 446 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 TAZQ16635 292 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 PYCR3Q53H96 274 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 HEATR6Q6AI08 1181 aaKnown RBP11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 TMC5Q6UXY8 1006 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 FRA10AC1Q70Z53 315 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 C11orf74Q86VG3 221 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 SMG8Q8ND04 991 aaKnown RBP11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 HDAC10Q969S8 669 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 ITCHQ96J02 903 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 EFHD1Q9BUP0 239 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 SNRNP25Q9BV90 132 aaKnown RBP11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 FUNDC2Q9BWH2 189 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 RAVER2Q9HCJ3 691 aaKnown RBP11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 SCUBE2Q9NQ36 999 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 MRGBPQ9NV56 204 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 OXSMQ9NWU1 459 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 PSME2Q9UL46 239 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 RAP2CQ9Y3L5 183 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 PTPRFP10586 1907 aa11.38□□□□□ -0.59
SEC61A1-202ENST00000424880 ASS1P00966 412 aaKnown RBP11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 CYP2F1P24903 491 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 MAGEA3P43357 314 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 ATP6V0D1P61421 351 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 CCNA1P78396 465 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 ZNF699Q32M78 642 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 DHRSXQ8N5I4 330 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 DNAAF3Q8N9W5 541 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 GMLQ99445 158 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 ZBED2Q9BTP6 218 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms