RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 SLC8A1P32418 973 aa20.3■□□□□ 0.84
USP39-204ENST00000409766 NUMBP49757 651 aa20.3■□□□□ 0.84
USP39-204ENST00000409766 GNA12Q03113 381 aa20.3■□□□□ 0.84
USP39-204ENST00000409766 ZNF460Q14592 562 aa20.3■□□□□ 0.84
USP39-204ENST00000409766 CNKSR3Q6P9H4 555 aa20.3■□□□□ 0.84
USP39-204ENST00000409766 ZYG11AQ6WRX3 759 aa20.3■□□□□ 0.84
USP39-204ENST00000409766 DENND1CQ8IV53 801 aa20.3■□□□□ 0.84
USP39-204ENST00000409766 OR52K2Q8NGK3 314 aa20.3■□□□□ 0.84
USP39-204ENST00000409766 CALML6Q8TD86 181 aa20.3■□□□□ 0.84
USP39-204ENST00000409766 AGAP11Q8TF27 550 aa20.3■□□□□ 0.84
USP39-204ENST00000409766 STYXQ8WUJ0 223 aa20.3■□□□□ 0.84
USP39-204ENST00000409766 SREK1Q8WXA9 508 aaKnown RBP20.3■□□□□ 0.84
USP39-204ENST00000409766 TSNARE1Q96NA8 513 aa20.3■□□□□ 0.84
USP39-204ENST00000409766 GPR78Q96P69 363 aa20.3■□□□□ 0.84
USP39-204ENST00000409766 CCDC106Q9BWC9 280 aa20.3■□□□□ 0.84
USP39-204ENST00000409766 FAM96AQ9H5X1 160 aa20.3■□□□□ 0.84
USP39-204ENST00000409766 TARM1B6A8C7 271 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 WFS1O76024 890 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 KLKB1P03952 638 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 SOD2P04179 222 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 CDH4P55283 916 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 TAS2R39P59534 338 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 BTG3Q14201 252 aaPredicted RBP20.29■□□□□ 0.84
USP39-204ENST00000409766 ZNF235Q14590 738 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 ALG1LQ6GMV1 187 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 CNSTQ6PJW8 725 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 RINLQ6ZS11 566 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 FSTL5Q8N475 847 aaPredicted RBP20.29■□□□□ 0.84
USP39-204ENST00000409766 PLD4Q96BZ4 506 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 ELMO2Q96JJ3 720 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 PRICKLE1Q96MT3 831 aaPredicted RBP20.29■□□□□ 0.84
USP39-204ENST00000409766 GATA5Q9BWX5 397 aaPredicted RBP20.29■□□□□ 0.84
USP39-204ENST00000409766 DNAJC28Q9NX36 388 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 TAS2R1Q9NYW7 299 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.29■□□□□ 0.84
USP39-204ENST00000409766 STC2O76061 302 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 LEPRP48357 1165 aaKnown RBP20.29■□□□□ 0.84
USP39-204ENST00000409766 IDH3AP50213 366 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 ALDH18A1P54886 795 aaKnown RBP20.29■□□□□ 0.84
USP39-204ENST00000409766 RPS24P62847 133 aaKnown RBP20.29■□□□□ 0.84
USP39-204ENST00000409766 POU4F1Q01851 419 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 RABGAP1LQ5R372 815 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 TPGS2Q68CL5 300 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 GPATCH11Q8N954 259 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 FEM1CQ96JP0 617 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 OMDQ99983 421 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 BEGAINQ9BUH8 593 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 TRPM5Q9NZQ8 1165 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 SORCS3Q9UPU3 1222 aa20.29■□□□□ 0.84
USP39-204ENST00000409766 GYG2O15488 501 aa20.28■□□□□ 0.84
USP39-204ENST00000409766 GSC2O15499 205 aa20.28■□□□□ 0.84
USP39-204ENST00000409766 SLC7A4O43246 635 aa20.28■□□□□ 0.84
USP39-204ENST00000409766 LDB2O43679 373 aa20.28■□□□□ 0.84
USP39-204ENST00000409766 EPOP01588 193 aa20.28■□□□□ 0.84
USP39-204ENST00000409766 GLRBP48167 497 aa20.28■□□□□ 0.84
USP39-204ENST00000409766 DSG1Q02413 1049 aa20.28■□□□□ 0.84
USP39-204ENST00000409766 DLG1Q12959 904 aa20.28■□□□□ 0.84
USP39-204ENST00000409766 TBCCQ15814 346 aa20.28■□□□□ 0.84
USP39-204ENST00000409766 ZNF789Q5FWF6 425 aa20.28■□□□□ 0.84
USP39-204ENST00000409766 LRRC8EQ6NSJ5 796 aa20.28■□□□□ 0.84
USP39-204ENST00000409766 OR7D4Q8NG98 312 aa20.28■□□□□ 0.84
USP39-204ENST00000409766 GABPB2Q8TAK5 448 aaPredicted RBP20.28■□□□□ 0.84
USP39-204ENST00000409766 CYP4F11Q9HBI6 524 aa20.28■□□□□ 0.84
USP39-204ENST00000409766 GKN1Q9NS71 199 aa20.28■□□□□ 0.84
USP39-204ENST00000409766 TBX21Q9UL17 535 aa20.28■□□□□ 0.84
USP39-204ENST00000409766 APOBEC2Q9Y235 224 aaKnown RBP20.28■□□□□ 0.84
USP39-204ENST00000409766 ANAPC1Q9H1A4 1944 aa20.28■□□□□ 0.84
USP39-204ENST00000409766 KLHL2O95198 593 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 HSPA4LO95757 839 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 CORO1AP31146 461 aaKnown RBP20.27■□□□□ 0.84
USP39-204ENST00000409766 LIPMQ5VYY2 423 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 GALNT7Q86SF2 657 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 CILP2Q8IUL8 1156 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 ZNF781Q8N8C0 355 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 NXNL1Q96CM4 212 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 IFT43Q96FT9 208 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 TRMT2BQ96GJ1 504 aaKnown RBP20.27■□□□□ 0.84
USP39-204ENST00000409766 SCYL1Q96KG9 808 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 RNF38Q9H0F5 515 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 MFSD1Q9H3U5 465 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 YIPF1Q9Y548 306 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 ACTL7AQ9Y615 435 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 CLDN11O75508 207 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 ENO1P06733 434 aaKnown RBP20.27■□□□□ 0.84
USP39-204ENST00000409766 HLA-DPA1P20036 260 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 CCND1P24385 295 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 ALDH1A3P47895 512 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 ARSDP51689 593 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 PRKAA2P54646 552 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 RBM20Q5T481 1227 aaKnown RBP20.27■□□□□ 0.84
USP39-204ENST00000409766 IL31Q6EBC2 164 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 TOP1MTQ969P6 601 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 HDAC10Q969S8 669 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 ZNF689Q96CS4 500 aaPredicted RBP20.27■□□□□ 0.84
USP39-204ENST00000409766 MGME1Q9BQP7 344 aa20.27■□□□□ 0.84
USP39-204ENST00000409766 RPL26L1Q9UNX3 145 aaKnown RBP20.27■□□□□ 0.84
USP39-204ENST00000409766 A0A087X1B8 175 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 PRR5-ARHGAP8B1AHC4 643 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 FGF1P05230 155 aa20.26■□□□□ 0.83
USP39-204ENST00000409766 SGSHP51688 502 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms