RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 C2P06681 752 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 RHOCP08134 193 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 MMP2P08253 660 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 PAMP19021 973 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 GLDCP23378 1020 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 AVPR1AP37288 418 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 SERPINB8P50452 374 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 SERPINH1P50454 418 aaKnown RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 SGSHP51688 502 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 ARFIP2P53365 341 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 EPHB3P54753 998 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 CSE1LP55060 971 aaKnown RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 SMAD3P84022 425 aaKnown RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 MPP1Q00013 466 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 GNA12Q03113 381 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 STX3Q13277 289 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 MTA1Q13330 715 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 ZNF177Q13360 481 aaPredicted RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 USP10Q14694 798 aaKnown RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 RABGAP1LQ5R372 815 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 TMCO4Q5TGY1 634 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 SNX30Q5VWJ9 437 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 TXNDC8Q6A555 127 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 FBXO46Q6PJ61 603 aaPredicted RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 NLRP9Q7RTR0 991 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 DDX53Q86TM3 631 aaKnown RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 CMTR2Q8IYT2 770 aaKnown RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 TNS4Q8IZW8 715 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 TEX26Q8N6G2 289 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 ARL14EPQ8N8R7 260 aaPredicted RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 GBP7Q8N8V2 638 aaPredicted RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 PNPLA1Q8N8W4 532 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 ARRDC2Q8TBH0 407 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 OVCA2Q8WZ82 227 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 BHMTQ93088 406 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 ERP27Q96DN0 273 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 IFT43Q96FT9 208 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 EXOC2Q96KP1 924 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 MYRFLQ96LU7 910 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 CEP295NLQ96MC4 621 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 SLC22A12Q96S37 553 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 HERC2P3Q9BVR0 1158 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 POLR1EQ9GZS1 481 aaKnown RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 MYLK2Q9H1R3 596 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 ECT2Q9H8V3 914 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 VPS45Q9NRW7 570 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 SIRPGQ9P1W8 387 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 MARCOQ9UEW3 520 aaPredicted RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 AGO1Q9UL18 857 aaKnown RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 EMCNQ9ULC0 261 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 MICAL3Q7RTP6 2002 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 HEATR9A2RTY3 570 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 CBX4O00257 560 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 PHGDHO43175 533 aaKnown RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 BUD23O43709 281 aaKnown RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 CLDN11O75508 207 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 PIRTP0C851 137 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 HDCP19113 662 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 ARNTP27540 789 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 GABRB3P28472 473 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 SCNN1BP51168 640 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 CDH4P55283 916 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 OXCT1P55809 520 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 IRF9Q00978 393 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 ZBTB16Q05516 673 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 BNIP1Q12981 228 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 FRG1Q14331 258 aaKnown RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 GALNTL6Q49A17 601 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 SIRPB2Q5JXA9 342 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 ADGRF1Q5T601 910 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 CES4AQ5XG92 561 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 ZNF470Q6ECI4 717 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 NEPROQ6NW34 567 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 KLHDC10Q6PID8 442 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 Q6ZVU0 165 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 NECAB2Q7Z6G3 386 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 TBC1D1Q86TI0 1168 aaPredicted RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 MTDHQ86UE4 582 aaKnown RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 ZC3HC1Q86WB0 502 aaKnown RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 C10orf107Q8IVU9 208 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 ARID3BQ8IVW6 561 aaPredicted RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 BBS5Q8N3I7 341 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 TMEM199Q8N511 208 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 OR6P1Q8NGX9 317 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 PLD4Q96BZ4 506 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 PRICKLE1Q96MT3 831 aaPredicted RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 ARHGAP9Q9BRR9 750 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 C20orf27Q9GZN8 174 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 MAGEH1Q9H213 219 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 RHOJQ9H4E5 214 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 RC3H2Q9HBD1 1191 aaKnown RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 ZNF334Q9HCZ1 680 aaPredicted RBP4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 ATP13A1Q9HD20 1204 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 HEY2Q9UBP5 337 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 TLK1Q9UKI8 766 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 PCDHB12Q9Y5F1 795 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 INSL5Q9Y5Q6 135 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 PLXNA3P51805 1871 aa4.02□□□□□ -1.77
LRRTM4-201ENST00000409088 NYNRINQ9P2P1 1898 aaKnown RBP4.01□□□□□ -1.77
LRRTM4-201ENST00000409088 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms