RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 STON1Q9Y6Q2 735 aa9.99□□□□□ -0.81
DDX39B-202ENST00000396172 COL6A3P12111 3177 aa9.99□□□□□ -0.81
DDX39B-202ENST00000396172 C1QTNF3-AMACRE9PGA6 284 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 MUSKO15146 869 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 EPOP01588 193 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 IL12RB1P42701 662 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 MAGEA9P43362 315 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 ZXDAP98168 799 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 HLTFQ14527 1009 aaKnown RBP eCLIP9.98□□□□□ -0.811e-9■□□□□ 10.3
DDX39B-202ENST00000396172 MYLK3Q32MK0 819 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 ATXN7L2Q5T6C5 722 aaPredicted RBP9.98□□□□□ -0.81
DDX39B-202ENST00000396172 RNASEH2BQ5TBB1 312 aaKnown RBP9.98□□□□□ -0.81
DDX39B-202ENST00000396172 ARMC3Q5W041 872 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 NCEH1Q6PIU2 408 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 SIX5Q8N196 739 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 PAF1Q8N7H5 531 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 MCUQ8NE86 351 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 CPT1BQ92523 772 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 FEM1CQ96JP0 617 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 ZNF641Q96N77 438 aaPredicted RBP9.98□□□□□ -0.81
DDX39B-202ENST00000396172 TBL1YQ9BQ87 522 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 ADGRE3Q9BY15 652 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 PHACTR1Q9C0D0 580 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 ZDHHC6Q9H6R6 413 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 FBRSL1Q9HCM7 1045 aaKnown RBP9.98□□□□□ -0.81
DDX39B-202ENST00000396172 GDF3Q9NR23 364 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 DMGDHQ9UI17 866 aaKnown RBP9.98□□□□□ -0.81
DDX39B-202ENST00000396172 SNX24Q9Y343 169 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 RRP15Q9Y3B9 282 aaKnown RBP9.98□□□□□ -0.81
DDX39B-202ENST00000396172 CEP192Q8TEP8 1941 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 BHMG1C9JSJ3 638 aaPredicted RBP9.98□□□□□ -0.81
DDX39B-202ENST00000396172 BNIP3LO60238 219 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 RNF40O75150 1001 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 ZNF821O75541 412 aaPredicted RBP9.98□□□□□ -0.81
DDX39B-202ENST00000396172 SUN1O94901 812 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 KLF8O95600 359 aaPredicted RBP9.98□□□□□ -0.81
DDX39B-202ENST00000396172 FGF1P05230 155 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 MLNP12872 115 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 HOXB2P14652 356 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 HLA-DPA1P20036 260 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 IVDP26440 423 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 RGRP47804 291 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 ITGA8P53708 1063 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 RPL26P61254 145 aaKnown RBP9.98□□□□□ -0.81
DDX39B-202ENST00000396172 SKOR1P84550 965 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 SIGLEC14Q08ET2 396 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 SFSWAPQ12872 951 aaKnown RBP9.98□□□□□ -0.81
DDX39B-202ENST00000396172 UBXN2BQ14CS0 331 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 C2orf27AQ580R0 203 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 FAXCQ5TGI0 409 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 FAM46CQ5VWP2 391 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 HIBCHQ6NVY1 386 aaPredicted RBP9.98□□□□□ -0.81
DDX39B-202ENST00000396172 DPY19L3Q6ZPD9 716 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 PRUNE1Q86TP1 453 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 C10orf67Q8IYJ2 551 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 IPMKQ8NFU5 416 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 OR2A12Q8NGT7 310 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 HCAR2Q8TDS4 363 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 PTPRN2Q92932 1015 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 TADA1Q96BN2 335 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 SRPK1Q96SB4 655 aaKnown RBP9.98□□□□□ -0.81
DDX39B-202ENST00000396172 UHRF1Q96T88 793 aaPredicted RBP9.98□□□□□ -0.81
DDX39B-202ENST00000396172 TDRD1Q9BXT4 1180 aaKnown RBP9.98□□□□□ -0.81
DDX39B-202ENST00000396172 TBC1D17Q9HA65 648 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 NOD2Q9HC29 1040 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 CACNA2D2Q9NY47 1150 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 EVLQ9UI08 416 aaPredicted RBP9.98□□□□□ -0.81
DDX39B-202ENST00000396172 MMP17Q9ULZ9 603 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 RPL26L1Q9UNX3 145 aaKnown RBP9.98□□□□□ -0.81
DDX39B-202ENST00000396172 PLXNA2O75051 1894 aa9.98□□□□□ -0.81
DDX39B-202ENST00000396172 KRBA1A5PL33 1030 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 CHURC1-FNTBB4DL54 471 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 PPFIA2O75334 1257 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 PMPCBO75439 489 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 ADH1BP00325 375 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 MMP2P08253 660 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 PRKCHP24723 683 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 WNT3AP56704 352 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 POLR2LP62875 67 aaKnown RBP9.97□□□□□ -0.81
DDX39B-202ENST00000396172 MRPS25P82663 173 aaKnown RBP9.97□□□□□ -0.81
DDX39B-202ENST00000396172 NIPAL4Q0D2K0 466 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 CCDC15Q0P6D6 951 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 CDH17Q12864 832 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 CAMK2GQ13555 558 aaPredicted RBP9.97□□□□□ -0.81
DDX39B-202ENST00000396172 MAP9Q49MG5 647 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 HSP90B2PQ58FF3 399 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 ARMC12Q5T9G4 340 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 KCTD11Q693B1 232 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 KDELC1Q6UW63 502 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 PRPF39Q86UA1 669 aaKnown RBP9.97□□□□□ -0.81
DDX39B-202ENST00000396172 SFTPA1Q8IWL2 248 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 TAB3Q8N5C8 712 aaPredicted RBP9.97□□□□□ -0.81
DDX39B-202ENST00000396172 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.97□□□□□ -0.815e-12■■■■□ 22.4
DDX39B-202ENST00000396172 PDCD7Q8N8D1 485 aaKnown RBP9.97□□□□□ -0.81
DDX39B-202ENST00000396172 NAT8LQ8N9F0 302 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 IL17RCQ8NAC3 791 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 TMIEQ8NEW7 156 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 SPATA22Q8NHS9 363 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 RPLP0P6Q8NHW5 317 aa9.97□□□□□ -0.81
DDX39B-202ENST00000396172 PRCCQ92733 491 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms