RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 GNEQ9Y223 722 aaKnown RBP13.05□□□□□ -0.32
USP11-204ENST00000377107 PTGDR2Q9Y5Y4 395 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 GRID2O43424 1007 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 CEACAM7Q14002 265 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 STXBP5Q5T5C0 1151 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 FAM91A1Q658Y4 838 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 PDSS2Q86YH6 399 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 MFSD6LQ8IWD5 586 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 JADE3Q92613 823 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 BHMTQ93088 406 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 VAT1Q99536 393 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 KATNAL1Q9BW62 490 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 GRIP2Q9C0E4 1043 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 EPS15L1Q9UBC2 864 aa13.05□□□□□ -0.32
USP11-204ENST00000377107 SF3B1O75533 1304 aaKnown RBP eCLIP13.05□□□□□ -0.324e-7■■■■■ 86.2
USP11-204ENST00000377107 TMEM114B3SHH9 223 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 UBDO15205 165 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 APOA4P06727 396 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 CALRP27797 417 aaKnown RBP13.04□□□□□ -0.32
USP11-204ENST00000377107 YWHAHQ04917 246 aaPredicted RBP13.04□□□□□ -0.32
USP11-204ENST00000377107 SLC10A7Q0GE19 358 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 FASTKQ14296 549 aaKnown RBP13.04□□□□□ -0.32
USP11-204ENST00000377107 DBN1Q16643 649 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 RAP1GAP2Q684P5 730 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 AAGABQ6PD74 315 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 CFAP52Q8N1V2 620 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 TMEM86AQ8N2M4 240 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 ATAD1Q8NBU5 361 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 NAT14Q8WUY8 206 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 ZNF419Q96HQ0 510 aaPredicted RBP13.04□□□□□ -0.32
USP11-204ENST00000377107 NMUR1Q9HB89 426 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 FAM50BQ9Y247 325 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 CNTN5O94779 1100 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 GFAPP14136 432 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 CRABP2P29373 138 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 MTTPP55157 894 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 GRIK3Q13003 919 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 GALNT3Q14435 633 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 MARC1Q5VT66 337 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 KCTD11Q693B1 232 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 AFAP1L2Q8N4X5 818 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 CEP70Q8NHQ1 597 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 IFT43Q96FT9 208 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 SPC25Q9HBM1 224 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 DDX18Q9NVP1 670 aaKnown RBP13.04□□□□□ -0.32
USP11-204ENST00000377107 GMPR2Q9P2T1 348 aaKnown RBP13.04□□□□□ -0.32
USP11-204ENST00000377107 PCDHGB4Q9UN71 923 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 PCDHGB5Q9Y5G0 923 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 TRPV2Q9Y5S1 764 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 C15orf38-AP3S2A0A0A6YYH1 394 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 LRRC14BA6NHZ5 514 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 E9PAM4 449 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 KIF3CO14782 793 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 SIX3O95343 332 aaPredicted RBP13.04□□□□□ -0.32
USP11-204ENST00000377107 MSLNQ13421 630 aaPredicted RBP13.04□□□□□ -0.32
USP11-204ENST00000377107 RBBP5Q15291 538 aaKnown RBP13.04□□□□□ -0.32
USP11-204ENST00000377107 C10orf120Q5SQS8 335 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 ARPINQ7Z6K5 226 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 ZC3H15Q8WU90 426 aaKnown RBP13.04□□□□□ -0.32
USP11-204ENST00000377107 PSMG2Q969U7 264 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 SEPT5Q99719 369 aaPredicted RBP13.04□□□□□ -0.32
USP11-204ENST00000377107 OLFM1Q99784 485 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 UBE2OQ9C0C9 1292 aaKnown RBP13.04□□□□□ -0.32
USP11-204ENST00000377107 UXTQ9UBK9 157 aaPredicted RBP13.04□□□□□ -0.32
USP11-204ENST00000377107 TCAF1Q9Y4C2 921 aa13.04□□□□□ -0.32
USP11-204ENST00000377107 RGPD3A6NKT7 1758 aaPredicted RBP13.03□□□□□ -0.32
USP11-204ENST00000377107 RGPD4Q7Z3J3 1758 aa13.03□□□□□ -0.32
USP11-204ENST00000377107 CCDC189A1A4V9 331 aa13.03□□□□□ -0.32
USP11-204ENST00000377107 ZNF865P0CJ78 1059 aaPredicted RBP13.03□□□□□ -0.32
USP11-204ENST00000377107 LRPAP1P30533 357 aa13.03□□□□□ -0.32
USP11-204ENST00000377107 STX1BP61266 288 aa13.03□□□□□ -0.32
USP11-204ENST00000377107 INTS6LQ5JSJ4 861 aaKnown RBP13.03□□□□□ -0.32
USP11-204ENST00000377107 ZNF467Q7Z7K2 595 aaPredicted RBP13.03□□□□□ -0.32
USP11-204ENST00000377107 NUP93Q8N1F7 819 aa13.03□□□□□ -0.32
USP11-204ENST00000377107 ESAMQ96AP7 390 aa13.03□□□□□ -0.32
USP11-204ENST00000377107 RMDN1Q96DB5 314 aa13.03□□□□□ -0.32
USP11-204ENST00000377107 TBATAQ96M53 351 aa13.03□□□□□ -0.32
USP11-204ENST00000377107 UTP6Q9NYH9 597 aaKnown RBP13.03□□□□□ -0.32
USP11-204ENST00000377107 BTRCQ9Y297 605 aa13.03□□□□□ -0.32
USP11-204ENST00000377107 NR5A2O00482 541 aa13.03□□□□□ -0.32
USP11-204ENST00000377107 HAPLN1P10915 354 aaPredicted RBP13.03□□□□□ -0.32
USP11-204ENST00000377107 PSME3P61289 254 aa13.03□□□□□ -0.32
USP11-204ENST00000377107 PURAQ00577 322 aaKnown RBP13.03□□□□□ -0.32
USP11-204ENST00000377107 AGAP9Q5VTM2 703 aa13.03□□□□□ -0.32
USP11-204ENST00000377107 SPRYD7Q5W111 196 aa13.03□□□□□ -0.32
USP11-204ENST00000377107 RP9Q8TA86 221 aaKnown RBP13.03□□□□□ -0.32
USP11-204ENST00000377107 HMCESQ96FZ2 354 aa13.03□□□□□ -0.32
USP11-204ENST00000377107 NR1H4Q96RI1 486 aaPredicted RBP13.03□□□□□ -0.32
USP11-204ENST00000377107 PKP2Q99959 881 aa13.03□□□□□ -0.32
USP11-204ENST00000377107 STK39Q9UEW8 545 aa13.03□□□□□ -0.32
USP11-204ENST00000377107 EGFL7Q9UHF1 273 aa13.03□□□□□ -0.32
USP11-204ENST00000377107 AP4B1Q9Y6B7 739 aa13.03□□□□□ -0.32
USP11-204ENST00000377107 PTCH2Q9Y6C5 1203 aa13.03□□□□□ -0.32
USP11-204ENST00000377107 IRAK2O43187 625 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 AKAP10O43572 662 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 MAFKO60675 156 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 CHRNA1P02708 482 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 SBK3P0C264 359 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 SEMA3BQ13214 749 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 BIRC2Q13490 618 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms